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The map label for this gene is dppC [H]

Identifier: 89053269

GI number: 89053269

Start: 737772

End: 738596

Strand: Reverse

Name: dppC [H]

Synonym: Jann_0778

Alternate gene names: 89053269

Gene position: 738596-737772 (Counterclockwise)

Preceding gene: 89053270

Following gene: 89053268

Centisome position: 17.11

GC content: 65.33

Gene sequence:

>825_bases
ATGAGACGGCTTCCGTTTGCCCTTGTCATTGGCGCGCTGATCACGCTGGTGTTCATCGTTTTGGCGCTGGTGTCGCTGGT
CTGGACGCCCCATGACACGGCCAGCCTGACGATTTCGAACCGGCTGCAACCGGCCTCCGGCACCCACTGGTTCGGGACCG
ACCAATTCGGACGCGATCTGGTGTCGATGCTGATGGAGGGCACGCAGACCTCCATCGCCGTGGCGCTGGTGGCCGTGGGG
ATCGGGGTTTGTCTGGGGGTGCCTTTGGGGCTGGCCGCCGCCGCATCACGGGGGTCGCTGCTGGACGAGGTCATCATGCG
CGGCAACGACCTGATTTTCGCCTTCCCGTCGCTGGTCATCGCGATCCTGATCACGGCGATCTACGGCCCGTCCGCCACCA
ACGCGATCCTCGCCATCGGCATCTTCAACATCCCCGTCTTCGCCCGTGTGGCCCGCGGCGGCGCGCTGCCGATCTGGACA
CTGGATTACATTCTGGCGGCGCGCACGGCGGGCAAGGGCCCCGCGCGGATCAGCGTCGAACACATCCTACCCAATATCGC
CAACCTGTTGATCGTGCAGGCAACAATCCAGTTTTCGCTGGGGATATTGGCGGAGGCGGGGTTGTCTTACGTGGGGCTCG
GCGCGCAGCCCCCGACGGCGTCCCTTGGCAAGATGTTGGCCGACGCGCAGACGATGATCTATTCGCACGCCCATCTGGCG
CTGCTGCCGGGCCTGTCGATCGTGCTGCTGGTTCTGGGGTTGAACCTGATGGGCGACGGGCTCCGCGATGCGCTGGATCC
GCGCCTGCGGAGGGCCCGAGAATGA

Upstream 100 bases:

>100_bases
TTGTGGAGAGCGTGACCATGCTGCTGGTTTTCGCGGTCATCGTCGTGACGTTTCTGGTGGACGTGGCCTATGCCATCGTC
GACCCGAGGCTGCGCCGCGC

Downstream 100 bases:

>100_bases
TCGCGGTTGAGGGGCTGTGTCTGAACATCGGACCGGTGCAGATTTTGCACGACGTCAGCTTTGACATGGCGGGCGGAGAG
ATCTTCGGCCTGGTGGGGGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRRLPFALVIGALITLVFIVLALVSLVWTPHDTASLTISNRLQPASGTHWFGTDQFGRDLVSMLMEGTQTSIAVALVAVG
IGVCLGVPLGLAAAASRGSLLDEVIMRGNDLIFAFPSLVIAILITAIYGPSATNAILAIGIFNIPVFARVARGGALPIWT
LDYILAARTAGKGPARISVEHILPNIANLLIVQATIQFSLGILAEAGLSYVGLGAQPPTASLGKMLADAQTMIYSHAHLA
LLPGLSIVLLVLGLNLMGDGLRDALDPRLRRARE

Sequences:

>Translated_274_residues
MRRLPFALVIGALITLVFIVLALVSLVWTPHDTASLTISNRLQPASGTHWFGTDQFGRDLVSMLMEGTQTSIAVALVAVG
IGVCLGVPLGLAAAASRGSLLDEVIMRGNDLIFAFPSLVIAILITAIYGPSATNAILAIGIFNIPVFARVARGGALPIWT
LDYILAARTAGKGPARISVEHILPNIANLLIVQATIQFSLGILAEAGLSYVGLGAQPPTASLGKMLADAQTMIYSHAHLA
LLPGLSIVLLVLGLNLMGDGLRDALDPRLRRARE
>Mature_274_residues
MRRLPFALVIGALITLVFIVLALVSLVWTPHDTASLTISNRLQPASGTHWFGTDQFGRDLVSMLMEGTQTSIAVALVAVG
IGVCLGVPLGLAAAASRGSLLDEVIMRGNDLIFAFPSLVIAILITAIYGPSATNAILAIGIFNIPVFARVARGGALPIWT
LDYILAARTAGKGPARISVEHILPNIANLLIVQATIQFSLGILAEAGLSYVGLGAQPPTASLGKMLADAQTMIYSHAHLA
LLPGLSIVLLVLGLNLMGDGLRDALDPRLRRARE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=271, Percent_Identity=39.4833948339483, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787760, Length=256, Percent_Identity=41.015625, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1789964, Length=226, Percent_Identity=44.6902654867257, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=33.0612244897959, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1787549, Length=252, Percent_Identity=32.1428571428571, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787498, Length=264, Percent_Identity=32.9545454545455, Blast_Score=105, Evalue=4e-24,
Organism=Escherichia coli, GI1788505, Length=230, Percent_Identity=27.3913043478261, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28753; Mature: 28753

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLPFALVIGALITLVFIVLALVSLVWTPHDTASLTISNRLQPASGTHWFGTDQFGRDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VSMLMEGTQTSIAVALVAVGIGVCLGVPLGLAAAASRGSLLDEVIMRGNDLIFAFPSLVI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHH
AILITAIYGPSATNAILAIGIFNIPVFARVARGGALPIWTLDYILAARTAGKGPARISVE
HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEHH
HILPNIANLLIVQATIQFSLGILAEAGLSYVGLGAQPPTASLGKMLADAQTMIYSHAHLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLPGLSIVLLVLGLNLMGDGLRDALDPRLRRARE
HHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHCCC
>Mature Secondary Structure
MRRLPFALVIGALITLVFIVLALVSLVWTPHDTASLTISNRLQPASGTHWFGTDQFGRDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHH
VSMLMEGTQTSIAVALVAVGIGVCLGVPLGLAAAASRGSLLDEVIMRGNDLIFAFPSLVI
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEHHHHHHH
AILITAIYGPSATNAILAIGIFNIPVFARVARGGALPIWTLDYILAARTAGKGPARISVE
HHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEHH
HILPNIANLLIVQATIQFSLGILAEAGLSYVGLGAQPPTASLGKMLADAQTMIYSHAHLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLPGLSIVLLVLGLNLMGDGLRDALDPRLRRARE
HHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]