Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053236

Identifier: 89053236

GI number: 89053236

Start: 713937

End: 714287

Strand: Reverse

Name: 89053236

Synonym: Jann_0745

Alternate gene names: NA

Gene position: 714287-713937 (Counterclockwise)

Preceding gene: 89053239

Following gene: 89053235

Centisome position: 16.54

GC content: 62.68

Gene sequence:

>351_bases
GTGCGCTGGAGCGAGACCTCACGCTGTGTCTGCGCGCAAGCGCAGGGGACAAACCGGTGGCTTCCCACCACTTCAATAAA
TCGAGGGCAGGGCAACATTCCGTCACCTCCCTTCTTAGGACTTGAACATGAAATCAATCTACATCGCCGCCGCTGTCGCA
CTCCTGGGATCGGCGGCCTCCCCGAGGTGATGACCATCCCCGAGATCCGCCCCGACGCGCCGCAGCCCTACCGTACTTTG
ACCCTGTCGTTCGACGGCGACGGCACCGCGGGCGCGGTCTTCTTTGACCATGCGGGCGAGGATGACGGCGGCATCGTAAT
CGACAATGCCCGCTTTTCGGTCGCGCCGTAA

Upstream 100 bases:

>100_bases
CGTCGTAAATCTTGGTCAGGCGATCAACCGTTAGAATGGATGTCATTGGGGCCTCCTTGCGCAGACGCGCAATCTAGGCC
CGGGCGCGAGCGTCTACAAG

Downstream 100 bases:

>100_bases
ATGTTTGATCCTGTTATGTCGCCCGCGTAAACGGACGGCATGACCCAGTCACCCTCCAAATCATCCCCCTCCAAATCCCA
TGGTCGCCTGTCCCAATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MRWSETSRCVCAQAQGTNRWLPTTSINRGQGNIPSPPFLGLEHEINLHRRRCRTPGIGGLPEVMTIPEIRPDAPQPYRTL
TLSFDGDGTAGAVFFDHAGEDDGGIVIDNARFSVAP

Sequences:

>Translated_116_residues
MRWSETSRCVCAQAQGTNRWLPTTSINRGQGNIPSPPFLGLEHEINLHRRRCRTPGIGGLPEVMTIPEIRPDAPQPYRTL
TLSFDGDGTAGAVFFDHAGEDDGGIVIDNARFSVAP
>Mature_116_residues
MRWSETSRCVCAQAQGTNRWLPTTSINRGQGNIPSPPFLGLEHEINLHRRRCRTPGIGGLPEVMTIPEIRPDAPQPYRTL
TLSFDGDGTAGAVFFDHAGEDDGGIVIDNARFSVAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12658; Mature: 12658

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWSETSRCVCAQAQGTNRWLPTTSINRGQGNIPSPPFLGLEHEINLHRRRCRTPGIGGL
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCCC
PEVMTIPEIRPDAPQPYRTLTLSFDGDGTAGAVFFDHAGEDDGGIVIDNARFSVAP
CCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEECC
>Mature Secondary Structure
MRWSETSRCVCAQAQGTNRWLPTTSINRGQGNIPSPPFLGLEHEINLHRRRCRTPGIGGL
CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCCCC
PEVMTIPEIRPDAPQPYRTLTLSFDGDGTAGAVFFDHAGEDDGGIVIDNARFSVAP
CCEEECCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA