| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053179
Identifier: 89053179
GI number: 89053179
Start: 661612
End: 662214
Strand: Reverse
Name: 89053179
Synonym: Jann_0688
Alternate gene names: NA
Gene position: 662214-661612 (Counterclockwise)
Preceding gene: 89053180
Following gene: 89053178
Centisome position: 15.34
GC content: 62.35
Gene sequence:
>603_bases ATGCCACGGCAGATGCGCCCGGACATAGCAGACATCCGCACCGGCGCGGACCTGAGGCAATGGTATTGGCGCAAGGATGA GTTGGTGGCCCACGCCCGCACCCTTGGCCTGAAGCGCAGCGGCGCGAAGTTCACCATCCTCGACCGCATCGCCCATTTCC TCGACACCGGCGCGCGGGATCTGCCCGAGGCTCCAGCCCCAAAACCCACGTCTGACTTCGATTGGCACAGCGCCAAGCTG ACGCCAGACACAATCCTGACCGACAGTTACAAAAACACCCAGAACGTGCGCCGGTTCTTCAAGGCGCAGTTGGGGCCCAG GTTCGCTTTCTCCATCCCGTTGATGGCCTGGCTGAAGGAGAACAGCGGGAAAACGCTGAGCGACGCCTGCGCAGTCTGGC GCGACTTGCAGGCGGAGCGGCGCAGGCCCGGCTGGCAAAGCGACATCAAGGGCCACAACCAGTTCAACCAATACACACGG GATTTTCTCGCCGCCCATCCAGATCTCGGCATGGATGATGTGCGCCGGGTCTGGGCCAGGAAGATCCAGCAGCCGTCCCC CGATGGGCGGCACATCTATGAACCGTCGGATCTTGACCTTTAA
Upstream 100 bases:
>100_bases GCATTTTCACAGAATCGGACCGCTGGCTGCGCGTCTATAATGAGATCAGCGTCTTGGGCGCCATCGGCGTGTTGATCCTG GTCGTTTACAAGCCGTTCTG
Downstream 100 bases:
>100_bases GCTCCCCTCATTGTGGCGTGCATCTTCGCGGGGCTTCGGTATCTTGTGGGCATGAAACATCTTATCCCCGTGCTGCTCAT CGCCCTCTCCACCACCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MPRQMRPDIADIRTGADLRQWYWRKDELVAHARTLGLKRSGAKFTILDRIAHFLDTGARDLPEAPAPKPTSDFDWHSAKL TPDTILTDSYKNTQNVRRFFKAQLGPRFAFSIPLMAWLKENSGKTLSDACAVWRDLQAERRRPGWQSDIKGHNQFNQYTR DFLAAHPDLGMDDVRRVWARKIQQPSPDGRHIYEPSDLDL
Sequences:
>Translated_200_residues MPRQMRPDIADIRTGADLRQWYWRKDELVAHARTLGLKRSGAKFTILDRIAHFLDTGARDLPEAPAPKPTSDFDWHSAKL TPDTILTDSYKNTQNVRRFFKAQLGPRFAFSIPLMAWLKENSGKTLSDACAVWRDLQAERRRPGWQSDIKGHNQFNQYTR DFLAAHPDLGMDDVRRVWARKIQQPSPDGRHIYEPSDLDL >Mature_199_residues PRQMRPDIADIRTGADLRQWYWRKDELVAHARTLGLKRSGAKFTILDRIAHFLDTGARDLPEAPAPKPTSDFDWHSAKLT PDTILTDSYKNTQNVRRFFKAQLGPRFAFSIPLMAWLKENSGKTLSDACAVWRDLQAERRRPGWQSDIKGHNQFNQYTRD FLAAHPDLGMDDVRRVWARKIQQPSPDGRHIYEPSDLDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23168; Mature: 23037
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRQMRPDIADIRTGADLRQWYWRKDELVAHARTLGLKRSGAKFTILDRIAHFLDTGARD CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCC LPEAPAPKPTSDFDWHSAKLTPDTILTDSYKNTQNVRRFFKAQLGPRFAFSIPLMAWLKE CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH NSGKTLSDACAVWRDLQAERRRPGWQSDIKGHNQFNQYTRDFLAAHPDLGMDDVRRVWAR CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH KIQQPSPDGRHIYEPSDLDL HHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRQMRPDIADIRTGADLRQWYWRKDELVAHARTLGLKRSGAKFTILDRIAHFLDTGARD CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCC LPEAPAPKPTSDFDWHSAKLTPDTILTDSYKNTQNVRRFFKAQLGPRFAFSIPLMAWLKE CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH NSGKTLSDACAVWRDLQAERRRPGWQSDIKGHNQFNQYTRDFLAAHPDLGMDDVRRVWAR CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH KIQQPSPDGRHIYEPSDLDL HHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA