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The map label for this gene is yobV [H]

Identifier: 89053170

GI number: 89053170

Start: 651786

End: 652499

Strand: Reverse

Name: yobV [H]

Synonym: Jann_0679

Alternate gene names: 89053170

Gene position: 652499-651786 (Counterclockwise)

Preceding gene: 89053171

Following gene: 89053168

Centisome position: 15.11

GC content: 65.27

Gene sequence:

>714_bases
ATGCGCCGTGCCGACCGCCTCTTCCGTCTGATTGACCGCTTGCGTCCCGGCAAGCTGACCACCGCCCGTGCGCTGGCCGA
TGCGATGGAGGTATCGGAGCGGACAATCTATCGCGATATCGCGCATCTACAGGGCTCCGGCGTGCCCATCGAGGGAGAGG
CCGGCCTGGGCTACATGATGCGGGACGGCTATAACCTGCCGCCGCTGATGTTCACCGAAGAGGAGATCGTGGCGCTGAGC
GTCGGCGCGCGGATGTTGCAGACCTGGGGCGGGACCTCCATGGCGCGCGGGGCCGACAGCGCGCTCGACAAAATCACCGC
CGTGCTCCCCGATGCGACGCGCACCCGCGCCGAACGGCTGCGGTTTGAAGCCTGGACGACCAATCCGCTGGACGCCAAAA
CCCGGGCCACCATCGATACTGTCGAGGCCGCCATTCAGGCCGCAGAGCGCCTGTCCATCGACTACCGCGACGACAAGGGC
AACCCAACGGAGCGCATTCTGCGCCCGCTTGGCCTGTGGTTCTGGGGGTCTGTCTGGACGCTGGTGGCGTGGTGTGAATT
GCGCGATGCCTACCGCATGTTCCGCCTCGACCGCATTCTGGATGCCCGTAATCTGGGCGCGTTCACGCCCCACCCCGACC
AGACATTGGAGAACTTCTACGCGACCCAATTTGACCGGGATCATCGGGCCATGCGGACCTGCAAAGACGTCTGA

Upstream 100 bases:

>100_bases
ACAACTCAAAGCCGCCGCAAACCCCGCCATTCGCCGCTCTGACGAAGTGCTGTTCCAACACCCACTTTCCCCTCTTCCAG
CCGCAAGGTAGCCTTCCCCC

Downstream 100 bases:

>100_bases
AGCGCGTCGCCTAGGACGCCTGCAACGCTCTCCGGTCCTCGGGAACCGCAGCCATCGCGTCCCGCAGCACCTGCTCGGCC
CCATCCAACTCCTCGACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MRRADRLFRLIDRLRPGKLTTARALADAMEVSERTIYRDIAHLQGSGVPIEGEAGLGYMMRDGYNLPPLMFTEEEIVALS
VGARMLQTWGGTSMARGADSALDKITAVLPDATRTRAERLRFEAWTTNPLDAKTRATIDTVEAAIQAAERLSIDYRDDKG
NPTERILRPLGLWFWGSVWTLVAWCELRDAYRMFRLDRILDARNLGAFTPHPDQTLENFYATQFDRDHRAMRTCKDV

Sequences:

>Translated_237_residues
MRRADRLFRLIDRLRPGKLTTARALADAMEVSERTIYRDIAHLQGSGVPIEGEAGLGYMMRDGYNLPPLMFTEEEIVALS
VGARMLQTWGGTSMARGADSALDKITAVLPDATRTRAERLRFEAWTTNPLDAKTRATIDTVEAAIQAAERLSIDYRDDKG
NPTERILRPLGLWFWGSVWTLVAWCELRDAYRMFRLDRILDARNLGAFTPHPDQTLENFYATQFDRDHRAMRTCKDV
>Mature_237_residues
MRRADRLFRLIDRLRPGKLTTARALADAMEVSERTIYRDIAHLQGSGVPIEGEAGLGYMMRDGYNLPPLMFTEEEIVALS
VGARMLQTWGGTSMARGADSALDKITAVLPDATRTRAERLRFEAWTTNPLDAKTRATIDTVEAAIQAAERLSIDYRDDKG
NPTERILRPLGLWFWGSVWTLVAWCELRDAYRMFRLDRILDARNLGAFTPHPDQTLENFYATQFDRDHRAMRTCKDV

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 26996; Mature: 26996

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRADRLFRLIDRLRPGKLTTARALADAMEVSERTIYRDIAHLQGSGVPIEGEAGLGYMM
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RDGYNLPPLMFTEEEIVALSVGARMLQTWGGTSMARGADSALDKITAVLPDATRTRAERL
HCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHH
RFEAWTTNPLDAKTRATIDTVEAAIQAAERLSIDYRDDKGNPTERILRPLGLWFWGSVWT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVAWCELRDAYRMFRLDRILDARNLGAFTPHPDQTLENFYATQFDRDHRAMRTCKDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MRRADRLFRLIDRLRPGKLTTARALADAMEVSERTIYRDIAHLQGSGVPIEGEAGLGYMM
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
RDGYNLPPLMFTEEEIVALSVGARMLQTWGGTSMARGADSALDKITAVLPDATRTRAERL
HCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCHHHHHHHHH
RFEAWTTNPLDAKTRATIDTVEAAIQAAERLSIDYRDDKGNPTERILRPLGLWFWGSVWT
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LVAWCELRDAYRMFRLDRILDARNLGAFTPHPDQTLENFYATQFDRDHRAMRTCKDV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]