Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053169

Identifier: 89053169

GI number: 89053169

Start: 650930

End: 651775

Strand: Direct

Name: 89053169

Synonym: Jann_0678

Alternate gene names: NA

Gene position: 650930-651775 (Clockwise)

Preceding gene: 89053167

Following gene: 89053174

Centisome position: 15.07

GC content: 65.6

Gene sequence:

>846_bases
ATGACCGTGACCCAACGACCTAGCAGACTACATCACCCGGCGCAGCGAGGGCTTGTGCCAGACGCGCAGGCCATACGCGC
GGAGGATCCGATTGTTCGTCTGGCGCGCGAAGCGGTTGCCAAGATCGTCGCACAGGCGCAGATACCCGTGCCGCGGCCAA
AGGCAGACGGGCAACAATCCTCCCCCCAAATCACAGAACTGGCCCAGGCCCTGGTCGATACGGATCGGGCGCGGGTCGAT
GAGATGATTGCGGATTTGCTGGGCTCCGACCTTGGCGTTCGGGACCTTTGTCTGGATCACCTCGCCCCGGCGGCGCGGGT
GCTGGGGGCATTCTGGGAACGCGATCAACTGCAATTTGCCGATGTCAGCCTGGCAACGGCCCGCATTCAGGCCATCGTCC
GCACGATGCCGACAACACCCGTGCGCGCCGCGACTGGGCGCGATGACAGAACCCTCTTCGCGGCGGTGCCCGGAGAGACC
CACACCCTTGGCGTCGTCATGGCGGCAGATCATTTCCGGCGCTTGGGCTGGGACGTGAGCCTGCTGATCGGGATGGACCA
CAGCGATATCTGCCGCCGGGCCCGGACCGACGATTGCAACGTGATCGGCTTGAGTTGCGCCGGTCGCCATGCGGTCCCTG
CCCTGAGCCGTCTGATCCAAGAAATCCGCCACCTGCGCCCGGATATGGGCATTGTCCTGGCCGGGCATATCGTGACGGAC
CGGGAGGCGGTGGATGCCCTGCCGCAACTCGACGGACTTGTCGAGGAGTTGGATGGGGCCGAGCAGGTGCTGCGGGACGC
GATGGCTGCGGTTCCCGAGGACCGGAGAGCGTTGCAGGCGTCCTAG

Upstream 100 bases:

>100_bases
TAGACACATGGAGTGAAAACTATGGTATACAATAGTGGACCGCACGTGGATTCGCCTCCACAGGCTCTAGACCAGCCGTT
CCGTTGTGGTCGAGGGATGA

Downstream 100 bases:

>100_bases
GCGACGCGCTTCAGACGTCTTTGCAGGTCCGCATGGCCCGATGATCCCGGTCAAATTGGGTCGCGTAGAAGTTCTCCAAT
GTCTGGTCGGGGTGGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein PpaA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTVTQRPSRLHHPAQRGLVPDAQAIRAEDPIVRLAREAVAKIVAQAQIPVPRPKADGQQSSPQITELAQALVDTDRARVD
EMIADLLGSDLGVRDLCLDHLAPAARVLGAFWERDQLQFADVSLATARIQAIVRTMPTTPVRAATGRDDRTLFAAVPGET
HTLGVVMAADHFRRLGWDVSLLIGMDHSDICRRARTDDCNVIGLSCAGRHAVPALSRLIQEIRHLRPDMGIVLAGHIVTD
REAVDALPQLDGLVEELDGAEQVLRDAMAAVPEDRRALQAS

Sequences:

>Translated_281_residues
MTVTQRPSRLHHPAQRGLVPDAQAIRAEDPIVRLAREAVAKIVAQAQIPVPRPKADGQQSSPQITELAQALVDTDRARVD
EMIADLLGSDLGVRDLCLDHLAPAARVLGAFWERDQLQFADVSLATARIQAIVRTMPTTPVRAATGRDDRTLFAAVPGET
HTLGVVMAADHFRRLGWDVSLLIGMDHSDICRRARTDDCNVIGLSCAGRHAVPALSRLIQEIRHLRPDMGIVLAGHIVTD
REAVDALPQLDGLVEELDGAEQVLRDAMAAVPEDRRALQAS
>Mature_280_residues
TVTQRPSRLHHPAQRGLVPDAQAIRAEDPIVRLAREAVAKIVAQAQIPVPRPKADGQQSSPQITELAQALVDTDRARVDE
MIADLLGSDLGVRDLCLDHLAPAARVLGAFWERDQLQFADVSLATARIQAIVRTMPTTPVRAATGRDDRTLFAAVPGETH
TLGVVMAADHFRRLGWDVSLLIGMDHSDICRRARTDDCNVIGLSCAGRHAVPALSRLIQEIRHLRPDMGIVLAGHIVTDR
EAVDALPQLDGLVEELDGAEQVLRDAMAAVPEDRRALQAS

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30545; Mature: 30414

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVTQRPSRLHHPAQRGLVPDAQAIRAEDPIVRLAREAVAKIVAQAQIPVPRPKADGQQS
CCCCCCCHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SPQITELAQALVDTDRARVDEMIADLLGSDLGVRDLCLDHLAPAARVLGAFWERDQLQFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DVSLATARIQAIVRTMPTTPVRAATGRDDRTLFAAVPGETHTLGVVMAADHFRRLGWDVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
LLIGMDHSDICRRARTDDCNVIGLSCAGRHAVPALSRLIQEIRHLRPDMGIVLAGHIVTD
EEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEECC
REAVDALPQLDGLVEELDGAEQVLRDAMAAVPEDRRALQAS
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure 
TVTQRPSRLHHPAQRGLVPDAQAIRAEDPIVRLAREAVAKIVAQAQIPVPRPKADGQQS
CCCCCCHHHCCHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
SPQITELAQALVDTDRARVDEMIADLLGSDLGVRDLCLDHLAPAARVLGAFWERDQLQFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
DVSLATARIQAIVRTMPTTPVRAATGRDDRTLFAAVPGETHTLGVVMAADHFRRLGWDVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEE
LLIGMDHSDICRRARTDDCNVIGLSCAGRHAVPALSRLIQEIRHLRPDMGIVLAGHIVTD
EEEECCHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEECEEECC
REAVDALPQLDGLVEELDGAEQVLRDAMAAVPEDRRALQAS
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA