Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is paaX [C]

Identifier: 89053150

GI number: 89053150

Start: 630190

End: 630987

Strand: Direct

Name: paaX [C]

Synonym: Jann_0659

Alternate gene names: 89053150

Gene position: 630190-630987 (Clockwise)

Preceding gene: 89053149

Following gene: 89053152

Centisome position: 14.59

GC content: 68.3

Gene sequence:

>798_bases
GTGGCAGACGCATCTGACCCCATCCGCCCCCTTGTGGAGGCGCTGAACGCCGAGGCACCGCTGAAGCTTTGGTCGGTGCT
GGTCACCTGTCTGGGGGATGTCAGCCGCGACGGCGTGATCGAAGTTTCGGGCGTGGCGCTGTCGTCCTTTGTGGAACGTA
TGGGGCTGCAACCGCAGGCGATGCGGGTCGCGTTGCATCGGCTGAAGCGGGACGGATGGGTGGAGAGCCGCCGCCTGGGC
CGGGTTGGATTTCACCGCCTCTCGGACAGTGCGCTGACGCAGACCCGCGCCGTGGCTGGCCGGATCTACGGACCCGGCGC
CGGACCCGCCCCTTGGCATCTGGCCGGAATGCCGCCCGACGCGCCCGATGGGCTGTCACTTCTGCCGGACACGCTGTCGG
CGACCCCGATCTCCCGCAGGTTCGCGTTGATCTGTGGGCCGCTTGAGGATGTGCCGGAGGATTGGCTGCTGACCGCGCCG
TCGGGGCGGGGTCTTCCGGTGTGGGTGCAAGATGTGGTGGTGGAGGCGGGGTGCGAGGCCGAGTTCAAAGCGTTGGAGCG
CACGCTGGCCCAGATCGACAAGGTGCCCGACACGCGGTTGGAGCGGTTCACGTTGCGGGTGCTGGTCCTGCACGCATGGC
GGCGCCTGATCCTGAGGTCCAGCCCGGCGGCGGAGGCCGCATTGGGCGGGGCGCGCGCAGAGATATCCTGCCGCGCACGG
GTTCATCAGCTTTTGGATCAGCTGGGCTCGGTCGAGCCTGACTGGGATTTGCCCGCAACCGAAGACGCCGCATCGTGA

Upstream 100 bases:

>100_bases
TCAGTAATCAGGATGGCGATGCGGTGGCGGAATACGAGCTGCTGACGATGGTGGCGAAATGACTGGGGTTGCGAAATGAC
TGGGACTGCGAAGTAGGGCC

Downstream 100 bases:

>100_bases
GGCGCCCTTGCCGCATAGGGAGCCCGCGCCGTGGCATTGCCCGCATGGGCCACTTTGGTGGCGAGGCGGATAAACTCGGT
GCGTTCGTCGCTCGACAATC

Product: PaaX-like

Products: NA

Alternate protein names: PaaX-Like; PaaX Family Transcriptional Regulator; PaaX Domain-Containing Protein

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLG
RVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAP
SGRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR
VHQLLDQLGSVEPDWDLPATEDAAS

Sequences:

>Translated_265_residues
MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLG
RVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAP
SGRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR
VHQLLDQLGSVEPDWDLPATEDAAS
>Mature_264_residues
ADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQAMRVALHRLKRDGWVESRRLGR
VGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPDAPDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPS
GRGLPVWVQDVVVEAGCEAEFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRARV
HQLLDQLGSVEPDWDLPATEDAAS

Specific function: Negative Regulator Of The Paaz And Paaabcdefghijk Catabolic Operons. Binds The Consensus Sequence 5'- Wwtrtgattcgygwt-3'. Binding Of Paax Is Specifically Inhibited By Phenylacetyl-Coenzyme A. [C]

COG id: COG3327

COG function: function code K; Phenylacetic acid-responsive transcriptional repressor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28676; Mature: 28545

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQA
CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHH
MRVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEECCCCCC
APDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPSGRGLPVWVQDVVVEAGCEA
CCCCCHHCCCHHCCCCHHHHHHEEECCHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCH
EFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH
VHQLLDQLGSVEPDWDLPATEDAAS
HHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADASDPIRPLVEALNAEAPLKLWSVLVTCLGDVSRDGVIEVSGVALSSFVERMGLQPQA
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHH
MRVALHRLKRDGWVESRRLGRVGFHRLSDSALTQTRAVAGRIYGPGAGPAPWHLAGMPPD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCCEEECCCCCC
APDGLSLLPDTLSATPISRRFALICGPLEDVPEDWLLTAPSGRGLPVWVQDVVVEAGCEA
CCCCCHHCCCHHCCCCHHHHHHEEECCHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCH
EFKALERTLAQIDKVPDTRLERFTLRVLVLHAWRRLILRSSPAAEAALGGARAEISCRAR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHH
VHQLLDQLGSVEPDWDLPATEDAAS
HHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA