| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is paaK [H]
Identifier: 89053147
GI number: 89053147
Start: 626342
End: 627646
Strand: Reverse
Name: paaK [H]
Synonym: Jann_0656
Alternate gene names: 89053147
Gene position: 627646-626342 (Counterclockwise)
Preceding gene: 89053148
Following gene: 89053146
Centisome position: 14.54
GC content: 63.52
Gene sequence:
>1305_bases ATGAGAGACCTGACACCCCCCCGTGACACCCTCGACCCGATCGAGATCGCCTCGCGCGATGAAATCGCAGCCCTCCAGCT GAGCCGCCTGAAATGGTCCCTCCAGCACGCCTATGACAACGTCCCCTTCTACCGCGCGCAATTCGACGCGGCGAGCGTGC ATCCGTCCGACCTGCACAGCCTCGAAGACCTCGCCAAATTCCCCTTCACCGTGAAGTCCGACCTGCGCGACAATTACCCC TTCGGCCTCTTCGCCGTCCCCCGCGACCGGATCAGTCGTATCCATGCCTCCTCGGGCACCACGGGCAAACCGACCGTCGT GGGCTACACCAAAAGCGACATTACCATGTGGTCCAACATGGTCGCCCGCTCCATGCGCGCATCGGGCACTGCGCCCGGCG ATCTGGTCCACATCGCCTATGGCTACGGCCTGTTCACCGGCGGCCTCGGCGCCCATTACGGCGCGGAGGCGTTGGGCTGC ACCGTTGTGCCCGTCTCCGGCGGAATGACGGCGCGGCAGGTCACTCTTATAGAAGATTTCCAACCCACCACGATCATGGT CACCCCGTCCTACATGCTGAACCTGCTGGAGGAATATCACCGACAGGGCCTCGACCCGCGCAGCACTAGCCTGGAGGTCG GCATCTTCGGGGCCGAGCCCTGGACCAACAAGATGCGCGCCGAGGTCGAGAGCGCCTTTGATATGCATGCCGTGGACATC TATGGCCTCAGCGAAGTCATGGGCCCCGGCGTCGCCAATGAATGCGTGGAGACCAAAGACGGCCTGCATATCTGGGAGGA CAATTTCTACCCCGAAATCATCGACCCACAGACCGGTGAGGTGCTGCCCGATGGCGAGATGGGGGAACTTGTCTTTACCA CGCTGACCAAGGAAGGCATGCCGATCATCCGCTACCGCACCCGGGATCTGACCCGCCTTCTGCCCGGCACCGCGCGGTCC ATGCGGCGGATGGAAAAGATCACGGGCCGCTCCGACGACATGATCATCCTGCGCGGCGTCAACGTCTTCCCCACCCAGAT CGAGGAGCAGGTGCTGACGGTGGATGGCCTGGCACCCTACTACCAGATCGAACTGGTCAAGAACGGCCAGATGGACGCCA TGCGCGTGCATGTGGAAAGCCTGCCCAACCACGGCGACGGCGAAGCCCAGGCGGTGCAGGCCGCAACCCTGGCACACCGG ATCAAAGAAGTGGTGGGCATATCCACCGACGTGCAGGTCGCCCTCCCCGGCAGCGTGGAACGCAGTGAGGGCAAGGCCCG GCGGGTGGTCGATAATCGCGGCTAA
Upstream 100 bases:
>100_bases GCATCACTGACGTCACCGTTACAAATCAAACGGGCGAGACCGTCGCCCTGTTCCGCGGTGCATCGCGTGCCATCGGCGGC CATCTGTTCGAGGAAAAGAT
Downstream 100 bases:
>100_bases GGATGTCGCCCCGGCAAGCCGGGGCGACCAGCTGGGGGAGGCGCTGCCTCCCCCAGACCCCCTCCGGGATATTTGAAGAA CGGGGAATGACAGGCATTGC
Product: phenylacetate-CoA ligase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MRDLTPPRDTLDPIEIASRDEIAALQLSRLKWSLQHAYDNVPFYRAQFDAASVHPSDLHSLEDLAKFPFTVKSDLRDNYP FGLFAVPRDRISRIHASSGTTGKPTVVGYTKSDITMWSNMVARSMRASGTAPGDLVHIAYGYGLFTGGLGAHYGAEALGC TVVPVSGGMTARQVTLIEDFQPTTIMVTPSYMLNLLEEYHRQGLDPRSTSLEVGIFGAEPWTNKMRAEVESAFDMHAVDI YGLSEVMGPGVANECVETKDGLHIWEDNFYPEIIDPQTGEVLPDGEMGELVFTTLTKEGMPIIRYRTRDLTRLLPGTARS MRRMEKITGRSDDMIILRGVNVFPTQIEEQVLTVDGLAPYYQIELVKNGQMDAMRVHVESLPNHGDGEAQAVQAATLAHR IKEVVGISTDVQVALPGSVERSEGKARRVVDNRG
Sequences:
>Translated_434_residues MRDLTPPRDTLDPIEIASRDEIAALQLSRLKWSLQHAYDNVPFYRAQFDAASVHPSDLHSLEDLAKFPFTVKSDLRDNYP FGLFAVPRDRISRIHASSGTTGKPTVVGYTKSDITMWSNMVARSMRASGTAPGDLVHIAYGYGLFTGGLGAHYGAEALGC TVVPVSGGMTARQVTLIEDFQPTTIMVTPSYMLNLLEEYHRQGLDPRSTSLEVGIFGAEPWTNKMRAEVESAFDMHAVDI YGLSEVMGPGVANECVETKDGLHIWEDNFYPEIIDPQTGEVLPDGEMGELVFTTLTKEGMPIIRYRTRDLTRLLPGTARS MRRMEKITGRSDDMIILRGVNVFPTQIEEQVLTVDGLAPYYQIELVKNGQMDAMRVHVESLPNHGDGEAQAVQAATLAHR IKEVVGISTDVQVALPGSVERSEGKARRVVDNRG >Mature_434_residues MRDLTPPRDTLDPIEIASRDEIAALQLSRLKWSLQHAYDNVPFYRAQFDAASVHPSDLHSLEDLAKFPFTVKSDLRDNYP FGLFAVPRDRISRIHASSGTTGKPTVVGYTKSDITMWSNMVARSMRASGTAPGDLVHIAYGYGLFTGGLGAHYGAEALGC TVVPVSGGMTARQVTLIEDFQPTTIMVTPSYMLNLLEEYHRQGLDPRSTSLEVGIFGAEPWTNKMRAEVESAFDMHAVDI YGLSEVMGPGVANECVETKDGLHIWEDNFYPEIIDPQTGEVLPDGEMGELVFTTLTKEGMPIIRYRTRDLTRLLPGTARS MRRMEKITGRSDDMIILRGVNVFPTQIEEQVLTVDGLAPYYQIELVKNGQMDAMRVHVESLPNHGDGEAQAVQAATLAHR IKEVVGISTDVQVALPGSVERSEGKARRVVDNRG
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=428, Percent_Identity=63.785046728972, Blast_Score=565, Evalue=1e-162,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 47926; Mature: 47926
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS00133 CARBOXYPEPT_ZN_2 ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLTPPRDTLDPIEIASRDEIAALQLSRLKWSLQHAYDNVPFYRAQFDAASVHPSDLHS CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH LEDLAKFPFTVKSDLRDNYPFGLFAVPRDRISRIHASSGTTGKPTVVGYTKSDITMWSNM HHHHHHCCCEEHHHCCCCCCEEEEECCHHHHHHEECCCCCCCCCEEEEEECCHHHHHHHH VARSMRASGTAPGDLVHIAYGYGLFTGGLGAHYGAEALGCTVVPVSGGMTARQVTLIEDF HHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCEEEEEECCCCCEEEEEEEECC QPTTIMVTPSYMLNLLEEYHRQGLDPRSTSLEVGIFGAEPWTNKMRAEVESAFDMHAVDI CCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEE YGLSEVMGPGVANECVETKDGLHIWEDNFYPEIIDPQTGEVLPDGEMGELVFTTLTKEGM ECHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCC PIIRYRTRDLTRLLPGTARSMRRMEKITGRSDDMIILRGVNVFPTQIEEQVLTVDGLAPY CEEEECHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHEEEECCCCCE YQIELVKNGQMDAMRVHVESLPNHGDGEAQAVQAATLAHRIKEVVGISTDVQVALPGSVE EEEEEEECCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC RSEGKARRVVDNRG CCCCCHHHHCCCCC >Mature Secondary Structure MRDLTPPRDTLDPIEIASRDEIAALQLSRLKWSLQHAYDNVPFYRAQFDAASVHPSDLHS CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHH LEDLAKFPFTVKSDLRDNYPFGLFAVPRDRISRIHASSGTTGKPTVVGYTKSDITMWSNM HHHHHHCCCEEHHHCCCCCCEEEEECCHHHHHHEECCCCCCCCCEEEEEECCHHHHHHHH VARSMRASGTAPGDLVHIAYGYGLFTGGLGAHYGAEALGCTVVPVSGGMTARQVTLIEDF HHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCCHHHCEEEEEECCCCCEEEEEEEECC QPTTIMVTPSYMLNLLEEYHRQGLDPRSTSLEVGIFGAEPWTNKMRAEVESAFDMHAVDI CCCEEEECHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCEEEEEE YGLSEVMGPGVANECVETKDGLHIWEDNFYPEIIDPQTGEVLPDGEMGELVFTTLTKEGM ECHHHHHCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHCCCC PIIRYRTRDLTRLLPGTARSMRRMEKITGRSDDMIILRGVNVFPTQIEEQVLTVDGLAPY CEEEECHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHEEEECCCCCE YQIELVKNGQMDAMRVHVESLPNHGDGEAQAVQAATLAHRIKEVVGISTDVQVALPGSVE EEEEEEECCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC RSEGKARRVVDNRG CCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]