| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is paaA
Identifier: 89053146
GI number: 89053146
Start: 625167
End: 626144
Strand: Reverse
Name: paaA
Synonym: Jann_0655
Alternate gene names: 89053146
Gene position: 626144-625167 (Counterclockwise)
Preceding gene: 89053147
Following gene: 89053145
Centisome position: 14.5
GC content: 61.55
Gene sequence:
>978_bases ATGTACGCGCAAATGGTGAAATCCGAGGCCAGCACTGATGATCCTGCGAAGCTTGCCGAATTTCAGGCTCGCATCGACGC AGGCGAGAAGATCGAGCCCAAGGACTGGATGCCAGAAGGGTATCGCAAGACGCTGATCCGCCAGATCGGTCAGCACGCGC ATTCGGAAATCGTAGGCCAGCTGCCCGAGGGCAACTGGATCACCCGCGCGCCGACGCTGGAGCGCAAGGCGATCCTGCTG GCCAAAGTTCAGGACGAGGCGGGCCATGGCCTCTACCTCTATTGCGCGGCGGAGACATTGGGGATTTCCCGCGACGAGAT GACGGAAATGCTGCTGGACGGGCGCATGAAATATTCGTCGATCTTCGCCTACCCCACCCTGACCTGGGCCGATATGGGCG CGGTCGGCTGGCTTGTGGACGGGGCCGCGATCATGAACCAGGTGCCGCTGCAACGCACGTCATTCGGGCCCTATGCCCGC GCGATGATCCGCGTCTGCAAGGAAGAGAGCTTCCACCAGCGCCAGGGTTTCGACATCATGATGAAGATGTGCAACGGAAC TGAGTCCCAGAAGCGCATGGCCCAGGACGCGCTGAACCGCCTGTGGTTTCCGTCGCTGATGATGTTCGGCCCATCCGATG CCAACAGCACCCACTCCGAACAATCCATGGCGTGGAAGATCAAGATGAACACCAACGATGAGCTGCGCCAGAAGTTCGTC GACCAGACGGTGCCGCAAGCCGAATACCTTGGCTTGACTGTGCCGGACGAGACGTTGGCCTGGAATGACGAGAAGCAGGG CTATGATTTCGCTGAGCCCGATTGGGATGAGTTCTTCGACGTGCTCAAAGGCAACGGGCCGTGCTCGGCTGACCGCATCG CAACGCGCCAGAAGGCCTGGGACGACGGCGCCTGGGTGCGGGACGGGCTGATGGCGCATGCGGCGAAGACGCAGGCCGCG AAAGTCGCGGCGGAGTGA
Upstream 100 bases:
>100_bases TGCGTTACAAAAAATTGGCGCCCCAAGATCTTTGGTAACATTATGTTGGACGCGACCTGCGAATTCTGTTAGTTTGCAGA CTCTATGAGGGAGACTGTCC
Downstream 100 bases:
>100_bases CCAAATCTCTTGCAAGAGATTTGCCAGTGCCTTGCAAGGCTCTGGCCACGCCCTTTCAAGGGCGTGCCAAGGCTTTTGCA AAAGCCTTCCGCCCCCACAC
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MYAQMVKSEASTDDPAKLAEFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQLPEGNWITRAPTLERKAILL AKVQDEAGHGLYLYCAAETLGISRDEMTEMLLDGRMKYSSIFAYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYAR AMIRVCKEESFHQRQGFDIMMKMCNGTESQKRMAQDALNRLWFPSLMMFGPSDANSTHSEQSMAWKIKMNTNDELRQKFV DQTVPQAEYLGLTVPDETLAWNDEKQGYDFAEPDWDEFFDVLKGNGPCSADRIATRQKAWDDGAWVRDGLMAHAAKTQAA KVAAE
Sequences:
>Translated_325_residues MYAQMVKSEASTDDPAKLAEFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQLPEGNWITRAPTLERKAILL AKVQDEAGHGLYLYCAAETLGISRDEMTEMLLDGRMKYSSIFAYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYAR AMIRVCKEESFHQRQGFDIMMKMCNGTESQKRMAQDALNRLWFPSLMMFGPSDANSTHSEQSMAWKIKMNTNDELRQKFV DQTVPQAEYLGLTVPDETLAWNDEKQGYDFAEPDWDEFFDVLKGNGPCSADRIATRQKAWDDGAWVRDGLMAHAAKTQAA KVAAE >Mature_325_residues MYAQMVKSEASTDDPAKLAEFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQLPEGNWITRAPTLERKAILL AKVQDEAGHGLYLYCAAETLGISRDEMTEMLLDGRMKYSSIFAYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYAR AMIRVCKEESFHQRQGFDIMMKMCNGTESQKRMAQDALNRLWFPSLMMFGPSDANSTHSEQSMAWKIKMNTNDELRQKFV DQTVPQAEYLGLTVPDETLAWNDEKQGYDFAEPDWDEFFDVLKGNGPCSADRIATRQKAWDDGAWVRDGLMAHAAKTQAA KVAAE
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=303, Percent_Identity=66.3366336633663, Blast_Score=438, Evalue=1e-124,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 36665; Mature: 36665
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAQMVKSEASTDDPAKLAEFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQ CCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPEGNWITRAPTLERKAILLAKVQDEAGHGLYLYCAAETLGISRDEMTEMLLDGRMKYSS CCCCCEEECCCCCCHHEEEEEEECCCCCCCEEEEEECHHHCCCHHHHHHHHHHCCCHHHH IFAYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYARAMIRVCKEESFHQRQGFDIM EEECCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH MKMCNGTESQKRMAQDALNRLWFPSLMMFGPSDANSTHSEQSMAWKIKMNTNDELRQKFV HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH DQTVPQAEYLGLTVPDETLAWNDEKQGYDFAEPDWDEFFDVLKGNGPCSADRIATRQKAW HHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCC DDGAWVRDGLMAHAAKTQAAKVAAE CCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYAQMVKSEASTDDPAKLAEFQARIDAGEKIEPKDWMPEGYRKTLIRQIGQHAHSEIVGQ CCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC LPEGNWITRAPTLERKAILLAKVQDEAGHGLYLYCAAETLGISRDEMTEMLLDGRMKYSS CCCCCEEECCCCCCHHEEEEEEECCCCCCCEEEEEECHHHCCCHHHHHHHHHHCCCHHHH IFAYPTLTWADMGAVGWLVDGAAIMNQVPLQRTSFGPYARAMIRVCKEESFHQRQGFDIM EEECCCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH MKMCNGTESQKRMAQDALNRLWFPSLMMFGPSDANSTHSEQSMAWKIKMNTNDELRQKFV HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHH DQTVPQAEYLGLTVPDETLAWNDEKQGYDFAEPDWDEFFDVLKGNGPCSADRIATRQKAW HHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCC DDGAWVRDGLMAHAAKTQAAKVAAE CCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]