| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is bztA [H]
Identifier: 89053118
GI number: 89053118
Start: 599442
End: 600458
Strand: Direct
Name: bztA [H]
Synonym: Jann_0627
Alternate gene names: 89053118
Gene position: 599442-600458 (Clockwise)
Preceding gene: 89053117
Following gene: 89053119
Centisome position: 13.88
GC content: 63.91
Gene sequence:
>1017_bases ATGAAAAAATCCGTATTTCTCGGCACGCTCGCCGTTGCAGGTCTCTCTGCCGGCTTCGTCTCGGCCCAGACACTGGGTGA AGTACAAGAGCGGGGCACGCTGAACTGTGGCGTTTCCACCGGCCTGACCGGTTTCTCCGCACCTGACGCCAATGGTGAAT GGCAGGGGTTCGACGTCAGCGTTTGTCGCGCCGTCGCAGCCGCCGTTCTGGGCGACGCCGGTGCCGTTGAATTTGTTCCC ACCACGGGCCAGACGCGCTTTACCGCGCTGTCCTCCGGTGAGATCGACATGCTGGCCCGGAACACCACCTGGACGTTCTC CCGCGATGTGGACCTCGCGTTCGAATTCGTCGGCGTGAACTACTATGACGGTCAGGGCTTCATGGTCCCCCGCGAACTGG GCGTGTCCTCCGCACTGGAGCTGGACGGCGCAACGGTTTGCATCCAGACCGGCACGACGACCGAGCTGAACCTGGCGGAC TACTTCTCCTCGAACAACATGAGCTATGAGCCCGTGCCGATCGAGACCAACGCGGAAGCGCAGCAGCAGTACCTTGCTGG CGCCTGTGACGTCTACACGACGGACGCCTCCGGTCTGGCCGCAACGCGCGCCACGTTCGAGGATCCCTCCGCCCACGTCG TTCTGCCCGAGATCGTGTCCAAAGAGCCGCTTGGCCCGCTGGTCCGTCACGGCGACAACGAGTTCGGTGACGTCGTTCGC TGGACCCTGAACGCGCTGATCGCAGCGGAAGAGCTGGGTGTGACCTCTGCCAATGTCGGCGAGATCGGTGGCACCACGGA GAACCCCGAGATCCGTCGCCTTCTGGGCACCGAGGGTAACCTGGGCGAGATGCTTGGCCTCGACGCCGGTTGGGCCGCTG CGGCCATTGGCGCCGGTGGTAACTACGGTGAGATCTTTGATCGCCACATCGGCGAGTCCACACCCATCGGTCTGGCCCGT GGCCTGAACGCTCAGTGGACCGATGGCGGCCTGCTCTACGCACCGCCATTCCGCTAA
Upstream 100 bases:
>100_bases GCACTATGCGGAGGTTCGACAGGCCTCCGTGGCATATGCCAAGGCTCGTCAGGGCACGCAAAGATGAACCTGACGGGCGG TTCCACAGGAAGAGGTAAAC
Downstream 100 bases:
>100_bases ATCCTGACATTGGGGGGCGCGACCGAAAGGTCGCGCCCTTTCCATATTAGGTGCCACGCACAAAAAACGACTACAAAAAT ACGGCCACGCAAAGATGGCC
Product: lysine-arginine-ornithine-binding periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKKSVFLGTLAVAGLSAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFDVSVCRAVAAAVLGDAGAVEFVP TTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVGVNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLAD YFSSNNMSYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDVVR WTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEGNLGEMLGLDAGWAAAAIGAGGNYGEIFDRHIGESTPIGLAR GLNAQWTDGGLLYAPPFR
Sequences:
>Translated_338_residues MKKSVFLGTLAVAGLSAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFDVSVCRAVAAAVLGDAGAVEFVP TTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVGVNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLAD YFSSNNMSYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDVVR WTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEGNLGEMLGLDAGWAAAAIGAGGNYGEIFDRHIGESTPIGLAR GLNAQWTDGGLLYAPPFR >Mature_338_residues MKKSVFLGTLAVAGLSAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFDVSVCRAVAAAVLGDAGAVEFVP TTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVGVNYYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLAD YFSSNNMSYEPVPIETNAEAQQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDVVR WTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEGNLGEMLGLDAGWAAAAIGAGGNYGEIFDRHIGESTPIGLAR GLNAQWTDGGLLYAPPFR
Specific function: Part of a binding-protein-dependent transport system for glutamate, glutamine, aspartate and asparagine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 35379; Mature: 35379
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: PS00359 RIBOSOMAL_L11
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVFLGTLAVAGLSAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFDVS CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEECCHHCCCCCCCCCCCCCCCCCCCHH VCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVGVN HHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEE YYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNAEA EECCCCEECHHHHCCCCEEECCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHH QQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDVVR HHHHHHCCCEEEECCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCHHHHCCCCHHHHHHH WTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEGNLGEMLGLDAGWAAAAIGAGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHEECCCC NYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR CHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MKKSVFLGTLAVAGLSAGFVSAQTLGEVQERGTLNCGVSTGLTGFSAPDANGEWQGFDVS CCCCEEEHHHHHHHHHCCHHHHHHHHHHHHCCCEECCHHCCCCCCCCCCCCCCCCCCCHH VCRAVAAAVLGDAGAVEFVPTTGQTRFTALSSGEIDMLARNTTWTFSRDVDLAFEFVGVN HHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCEEEEEECCEEEEECCCEEEEEEEEEE YYDGQGFMVPRELGVSSALELDGATVCIQTGTTTELNLADYFSSNNMSYEPVPIETNAEA EECCCCEECHHHHCCCCEEECCCEEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCHH QQQYLAGACDVYTTDASGLAATRATFEDPSAHVVLPEIVSKEPLGPLVRHGDNEFGDVVR HHHHHHCCCEEEECCCCCCEEEECCCCCCCCEEEEHHHHCCCCCCHHHHCCCCHHHHHHH WTLNALIAAEELGVTSANVGEIGGTTENPEIRRLLGTEGNLGEMLGLDAGWAAAAIGAGG HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCHHHHEECCCC NYGEIFDRHIGESTPIGLARGLNAQWTDGGLLYAPPFR CHHHHHHHHCCCCCCCHHHCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809753 [H]