Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89053105

Identifier: 89053105

GI number: 89053105

Start: 589173

End: 589736

Strand: Direct

Name: 89053105

Synonym: Jann_0614

Alternate gene names: NA

Gene position: 589173-589736 (Clockwise)

Preceding gene: 89053104

Following gene: 89053106

Centisome position: 13.64

GC content: 59.04

Gene sequence:

>564_bases
TTGACTAACACCATCCTGCTTCCGTTGCAGGTTTCCAGCGCCGCGGAAGGCTTTCCCGCGGCGTTTCGCTTTTTGTGGAT
CCCGTTAATGGCGGCCTTGGTTTCGGCGCTGACGGCGTTTTGGGTATCCAGCCGCACAATCCGCGCCAACCAGGACATTG
CCCGCAAACGCGCAACGCTTGATCTGATCGAGCGGTCGGTATCCACCGAATATTATCTTCTTATCTATTCGACTTTCCGA
GAGGTCTTGGACAGCCCCAGCGGGTTTGAGCAGATCACTGACCCGCAAATGCCCGCCCTGGTCGAACAGCGCCGGAAGGT
CATCGCGTTCCTTAACCAGTATGAGTTGATCGCCATCGGGATCGAACAGGGTATTCTGGATGAAGAGCTCTACCGCGATT
ACATGCGCGGCACGGTCGTCCGGCACTGGGCGCGGGCGGAGGGGCTCGTCAACCATCTGCGCGCCGACACGCCCGATAGT
CGGGCGCCAAAAGCGTTCGAGAAATTCGAAGCGCTGGCCCTGAAATGGGAGACCGCGAAAGAGGCGGAGCGCCGAACGGG
ATAA

Upstream 100 bases:

>100_bases
TTCTGGACGCTTAACTTGTCTGAAACCGGTTTTGTGCTTATATTAAGTGGGTGGAAGTTAACTTTATGGAGGCGAATAAT
GATCGCACGTGAAGGATATC

Downstream 100 bases:

>100_bases
GGCTCTGCGCATGGTTTGGGGCGGCCTATTGACCTTTCCGAAAATGGGGCATACATCCCGCATCTTGACGGGGAATCAAA
TGCGCATTTGACCCCGATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTNTILLPLQVSSAAEGFPAAFRFLWIPLMAALVSALTAFWVSSRTIRANQDIARKRATLDLIERSVSTEYYLLIYSTFR
EVLDSPSGFEQITDPQMPALVEQRRKVIAFLNQYELIAIGIEQGILDEELYRDYMRGTVVRHWARAEGLVNHLRADTPDS
RAPKAFEKFEALALKWETAKEAERRTG

Sequences:

>Translated_187_residues
MTNTILLPLQVSSAAEGFPAAFRFLWIPLMAALVSALTAFWVSSRTIRANQDIARKRATLDLIERSVSTEYYLLIYSTFR
EVLDSPSGFEQITDPQMPALVEQRRKVIAFLNQYELIAIGIEQGILDEELYRDYMRGTVVRHWARAEGLVNHLRADTPDS
RAPKAFEKFEALALKWETAKEAERRTG
>Mature_186_residues
TNTILLPLQVSSAAEGFPAAFRFLWIPLMAALVSALTAFWVSSRTIRANQDIARKRATLDLIERSVSTEYYLLIYSTFRE
VLDSPSGFEQITDPQMPALVEQRRKVIAFLNQYELIAIGIEQGILDEELYRDYMRGTVVRHWARAEGLVNHLRADTPDSR
APKAFEKFEALALKWETAKEAERRTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21338; Mature: 21207

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTILLPLQVSSAAEGFPAAFRFLWIPLMAALVSALTAFWVSSRTIRANQDIARKRATL
CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH
DLIERSVSTEYYLLIYSTFREVLDSPSGFEQITDPQMPALVEQRRKVIAFLNQYELIAIG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
IEQGILDEELYRDYMRGTVVRHWARAEGLVNHLRADTPDSRAPKAFEKFEALALKWETAK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
EAERRTG
HHHHCCC
>Mature Secondary Structure 
TNTILLPLQVSSAAEGFPAAFRFLWIPLMAALVSALTAFWVSSRTIRANQDIARKRATL
CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHH
DLIERSVSTEYYLLIYSTFREVLDSPSGFEQITDPQMPALVEQRRKVIAFLNQYELIAIG
HHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
IEQGILDEELYRDYMRGTVVRHWARAEGLVNHLRADTPDSRAPKAFEKFEALALKWETAK
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
EAERRTG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA