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The map label for this gene is secY

Identifier: 89053103

GI number: 89053103

Start: 587144

End: 588514

Strand: Direct

Name: secY

Synonym: Jann_0612

Alternate gene names: 89053103

Gene position: 587144-588514 (Clockwise)

Preceding gene: 89053102

Following gene: 89053104

Centisome position: 13.6

GC content: 60.69

Gene sequence:

>1371_bases
ATGTCCTCAGCAGCGGAGCAAATGGCCGCCAACATGAGCTGGAGCGCGTTCGGCAAAGCGACCGAACTTCGTCAGCGCAT
CTGGTTCACTTTGGGCCTTCTGATCATTTACCGGATCGGCACCTACATTCCCGTGCCCGGTATCGACGCGGTGGAACTTC
GCGCTTTCTTTGACAGTGCAGCGGCGGGCCTTGGCGGTGTGCTCAACATGTTCACCGGCGGCGCGCTGAGCCGTATGGGT
GTCTTCGCCCTTGGGATCATGCCCTACATTTCGGCCTCGATCATCGTGCAGCTGATGTCGGCCATGGTGCCGGCGATGGA
GGCCTTGAAGAAAGAAGGCGAAAGCGGGCGCAAGAAGCTGAACCAATACACCCGCTATGGCACCGTGGCCCTTGCCACCG
CGCAGGCCTACGGTCTTGCGGTGTCCATGGAATCCGGCGGCCTTGCGTCTGATCCCGGCTGGTTCTTCCGCGCCGCCTGC
GTGATCACGCTGGTCGGCGGCACCATGTTCCTGATGTGGTTGGGGGAACAGATCACCAACCGGGGCATCGGCAACGGGAT
CTCCCTGATCATTTTCGTCGGCATCATCGCCGAGATCCCCGCCGCCCTTGCCCAGTTCTTCGAGACGGGCCGGTCCGGCG
CGCTATCCACGCCCGCAATTCTTGGCGTGATCCTGATGCTGATCGCGACGCTCTTCTTCGTGGTCTTCATGGAGAGGTCA
CTGCGAAAGATACACATCCAGTACCCCCGCCGACAGGTGGGCATGAAGGTCTATGATGGCGGCTCCAGCCACCTGCCGAT
CAAGGTGAACCCGGCGGGCGTGATCCCGGCGATCTTCGCCTCGTCCCTGCTGCTGTTGCCCACGACGTTGACAACCTTCG
GCGGAACGGAAGGCTCCGGCCCGGTGCTTGGCTGGATTCTGGCCAATTTCGGCCCCGGACAGCCGCTCTATCTGGTGTTC
TTCGCGTCGATGATCGTGTTCTTCACGTATTTCTACACCCTCAACGTGTCCTTCAAGACAGAGGACGTGGCCGATAACCT
GAAGAACCAGAACGGCTTCATCCCGGGCATCCGTCCCGGCGCGCGGACGGCGGAATATCTGGAATACGTGGTGCGACGCA
TCCTTGTTCTGGGTGCCGGCTATCTGGCGCTTGTGTGCATGATGCCCGAGATTGTGCGCACGAACCTGTCGATCACGGCC
TATTTCGGCGGCACCTCGATCCTGATCATTGTGTCGGTGGGGATGGACACGGTCCAACAAATCCAGTCTCATCTGCTGGC
CCACCAATACGAAGGCCTGCTGGAGAAGTCCCAGCTGCGCGGTCGTAAGAGTGGATCGAAGAAACCGCGTAAAGGACCGG
CGCGTCGATGA

Upstream 100 bases:

>100_bases
GCGGGGACCTCTCCGCCTACATCTTATCCCAAGGTTTTCTCGCGCCGCTCGGGCCTCCTCCAAGGGGTCCGGCGGCTTTG
CGTCTATTAGGTGGAACAGC

Downstream 100 bases:

>100_bases
ACATTATTCTGCTTGGCCCGCCTGGCGCGGGCAAAGGAACCCAGGCCGGTATCCTTGTGAAGGACCGCGGCATGGTGCAG
CTGTCCACTGGCGATATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 455

Protein sequence:

>456_residues
MSSAAEQMAANMSWSAFGKATELRQRIWFTLGLLIIYRIGTYIPVPGIDAVELRAFFDSAAAGLGGVLNMFTGGALSRMG
VFALGIMPYISASIIVQLMSAMVPAMEALKKEGESGRKKLNQYTRYGTVALATAQAYGLAVSMESGGLASDPGWFFRAAC
VITLVGGTMFLMWLGEQITNRGIGNGISLIIFVGIIAEIPAALAQFFETGRSGALSTPAILGVILMLIATLFFVVFMERS
LRKIHIQYPRRQVGMKVYDGGSSHLPIKVNPAGVIPAIFASSLLLLPTTLTTFGGTEGSGPVLGWILANFGPGQPLYLVF
FASMIVFFTYFYTLNVSFKTEDVADNLKNQNGFIPGIRPGARTAEYLEYVVRRILVLGAGYLALVCMMPEIVRTNLSITA
YFGGTSILIIVSVGMDTVQQIQSHLLAHQYEGLLEKSQLRGRKSGSKKPRKGPARR

Sequences:

>Translated_456_residues
MSSAAEQMAANMSWSAFGKATELRQRIWFTLGLLIIYRIGTYIPVPGIDAVELRAFFDSAAAGLGGVLNMFTGGALSRMG
VFALGIMPYISASIIVQLMSAMVPAMEALKKEGESGRKKLNQYTRYGTVALATAQAYGLAVSMESGGLASDPGWFFRAAC
VITLVGGTMFLMWLGEQITNRGIGNGISLIIFVGIIAEIPAALAQFFETGRSGALSTPAILGVILMLIATLFFVVFMERS
LRKIHIQYPRRQVGMKVYDGGSSHLPIKVNPAGVIPAIFASSLLLLPTTLTTFGGTEGSGPVLGWILANFGPGQPLYLVF
FASMIVFFTYFYTLNVSFKTEDVADNLKNQNGFIPGIRPGARTAEYLEYVVRRILVLGAGYLALVCMMPEIVRTNLSITA
YFGGTSILIIVSVGMDTVQQIQSHLLAHQYEGLLEKSQLRGRKSGSKKPRKGPARR
>Mature_455_residues
SSAAEQMAANMSWSAFGKATELRQRIWFTLGLLIIYRIGTYIPVPGIDAVELRAFFDSAAAGLGGVLNMFTGGALSRMGV
FALGIMPYISASIIVQLMSAMVPAMEALKKEGESGRKKLNQYTRYGTVALATAQAYGLAVSMESGGLASDPGWFFRAACV
ITLVGGTMFLMWLGEQITNRGIGNGISLIIFVGIIAEIPAALAQFFETGRSGALSTPAILGVILMLIATLFFVVFMERSL
RKIHIQYPRRQVGMKVYDGGSSHLPIKVNPAGVIPAIFASSLLLLPTTLTTFGGTEGSGPVLGWILANFGPGQPLYLVFF
ASMIVFFTYFYTLNVSFKTEDVADNLKNQNGFIPGIRPGARTAEYLEYVVRRILVLGAGYLALVCMMPEIVRTNLSITAY
FGGTSILIIVSVGMDTVQQIQSHLLAHQYEGLLEKSQLRGRKSGSKKPRKGPARR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=432, Percent_Identity=50, Blast_Score=379, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49265; Mature: 49134

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAAEQMAANMSWSAFGKATELRQRIWFTLGLLIIYRIGTYIPVPGIDAVELRAFFDSA
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AAGLGGVLNMFTGGALSRMGVFALGIMPYISASIIVQLMSAMVPAMEALKKEGESGRKKL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGTVALATAQAYGLAVSMESGGLASDPGWFFRAACVITLVGGTMFLMWLGEQITN
HHHHHHCHHHEEEHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGIGNGISLIIFVGIIAEIPAALAQFFETGRSGALSTPAILGVILMLIATLFFVVFMERS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKIHIQYPRRQVGMKVYDGGSSHLPIKVNPAGVIPAIFASSLLLLPTTLTTFGGTEGSG
HHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PVLGWILANFGPGQPLYLVFFASMIVFFTYFYTLNVSFKTEDVADNLKNQNGFIPGIRPG
CEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCCCCCCCC
ARTAEYLEYVVRRILVLGAGYLALVCMMPEIVRTNLSITAYFGGTSILIIVSVGMDTVQQ
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCHHHHHH
IQSHLLAHQYEGLLEKSQLRGRKSGSKKPRKGPARR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSAAEQMAANMSWSAFGKATELRQRIWFTLGLLIIYRIGTYIPVPGIDAVELRAFFDSA
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
AAGLGGVLNMFTGGALSRMGVFALGIMPYISASIIVQLMSAMVPAMEALKKEGESGRKKL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
NQYTRYGTVALATAQAYGLAVSMESGGLASDPGWFFRAACVITLVGGTMFLMWLGEQITN
HHHHHHCHHHEEEHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RGIGNGISLIIFVGIIAEIPAALAQFFETGRSGALSTPAILGVILMLIATLFFVVFMERS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRKIHIQYPRRQVGMKVYDGGSSHLPIKVNPAGVIPAIFASSLLLLPTTLTTFGGTEGSG
HHHHHHCCCHHHCCEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PVLGWILANFGPGQPLYLVFFASMIVFFTYFYTLNVSFKTEDVADNLKNQNGFIPGIRPG
CEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCCCCCCCC
ARTAEYLEYVVRRILVLGAGYLALVCMMPEIVRTNLSITAYFGGTSILIIVSVGMDTVQQ
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCHHHHHH
IQSHLLAHQYEGLLEKSQLRGRKSGSKKPRKGPARR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]