| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053086
Identifier: 89053086
GI number: 89053086
Start: 578462
End: 579136
Strand: Reverse
Name: 89053086
Synonym: Jann_0595
Alternate gene names: NA
Gene position: 579136-578462 (Counterclockwise)
Preceding gene: 89053113
Following gene: 89053085
Centisome position: 13.41
GC content: 67.41
Gene sequence:
>675_bases ATGGCCCGGGCCGATGTGGCGCCGCTGATTTCCATGGCTGCCGCCCCGCTATTTGCCGGGGTCACTGGCAACACTTCGGA GCCCGTCGGGACGGCGTCGGGCTCCTTGTTCTCCGGTAACGGTGTCGGGTACTTCGCCGCCTTGCCGCCCCGCGCGCGGG AGGAGCCGTTGATCGACCGGCCCCTCCGCGACCGCAGCCCTGTCGCGCAACTCTTGTCCCTGATCGCCCGGGTAGAAGCG GGCGTTGCGGGCTACGACGCCGTGCAGCATGGTGCGCGCATTCGGCCCTCTCGCCCGCCCACCCAGATGACGCTGGGTGA AATCCATGCATGGATCGCCGCAACGCCCGGCCAACCCCATGCCATTGGCCGGTATCAGTTCATCCCGCCGACCCTGCGCC GCGTGGCGCAAATCCGGGGCTTCGGGCCAGAGGTTCGGTTCACGCCCGAGGTGCAGGATGCGCTGGCGCTTGTCCTGCTA GAGGATGCGGGCCTGTCCACCTTTGAGCGTGACCAGATGCCGCGACGCCAGTTCATGCACAATCTCGCGCGGATCTGGGC GGGTCTGCCATTGCCAAACGGGCGCTCCTATTATGAGGGCTATGCCGGAAACAGCGCCGCCATGTCGTGGGAGACGTTCG AGCAGGGGGTGGAGCGGATTTGGCCGCGAGGGTGA
Upstream 100 bases:
>100_bases GCCTGTCCGTGATCGACACAAAGACGAGGCCAGAATGGCGTTGCAACTGTTTCGGGCGCTCGCCCTTCTCTTCGCCCAGA TCGGGCTCTTGATCCCCGGG
Downstream 100 bases:
>100_bases CACGTTTCGCTGGACGGAACTGGCGCTTGCGGTGTTATCCTTGGCGGCATGATGAACACTGCGCTCGACACCGCCTTCCA CCGCCTTGACACGCTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MARADVAPLISMAAAPLFAGVTGNTSEPVGTASGSLFSGNGVGYFAALPPRAREEPLIDRPLRDRSPVAQLLSLIARVEA GVAGYDAVQHGARIRPSRPPTQMTLGEIHAWIAATPGQPHAIGRYQFIPPTLRRVAQIRGFGPEVRFTPEVQDALALVLL EDAGLSTFERDQMPRRQFMHNLARIWAGLPLPNGRSYYEGYAGNSAAMSWETFEQGVERIWPRG
Sequences:
>Translated_224_residues MARADVAPLISMAAAPLFAGVTGNTSEPVGTASGSLFSGNGVGYFAALPPRAREEPLIDRPLRDRSPVAQLLSLIARVEA GVAGYDAVQHGARIRPSRPPTQMTLGEIHAWIAATPGQPHAIGRYQFIPPTLRRVAQIRGFGPEVRFTPEVQDALALVLL EDAGLSTFERDQMPRRQFMHNLARIWAGLPLPNGRSYYEGYAGNSAAMSWETFEQGVERIWPRG >Mature_223_residues ARADVAPLISMAAAPLFAGVTGNTSEPVGTASGSLFSGNGVGYFAALPPRAREEPLIDRPLRDRSPVAQLLSLIARVEAG VAGYDAVQHGARIRPSRPPTQMTLGEIHAWIAATPGQPHAIGRYQFIPPTLRRVAQIRGFGPEVRFTPEVQDALALVLLE DAGLSTFERDQMPRRQFMHNLARIWAGLPLPNGRSYYEGYAGNSAAMSWETFEQGVERIWPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24341; Mature: 24210
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARADVAPLISMAAAPLFAGVTGNTSEPVGTASGSLFSGNGVGYFAALPPRAREEPLIDR CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC PLRDRSPVAQLLSLIARVEAGVAGYDAVQHGARIRPSRPPTQMTLGEIHAWIAATPGQPH CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCC AIGRYQFIPPTLRRVAQIRGFGPEVRFTPEVQDALALVLLEDAGLSTFERDQMPRRQFMH CCCCEEECCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH NLARIWAGLPLPNGRSYYEGYAGNSAAMSWETFEQGVERIWPRG HHHHHHHCCCCCCCCCHHCCCCCCCHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure ARADVAPLISMAAAPLFAGVTGNTSEPVGTASGSLFSGNGVGYFAALPPRAREEPLIDR CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC PLRDRSPVAQLLSLIARVEAGVAGYDAVQHGARIRPSRPPTQMTLGEIHAWIAATPGQPH CCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHEEECCCCCC AIGRYQFIPPTLRRVAQIRGFGPEVRFTPEVQDALALVLLEDAGLSTFERDQMPRRQFMH CCCCEEECCHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHH NLARIWAGLPLPNGRSYYEGYAGNSAAMSWETFEQGVERIWPRG HHHHHHHCCCCCCCCCHHCCCCCCCHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA