| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89053065
Identifier: 89053065
GI number: 89053065
Start: 563416
End: 564243
Strand: Direct
Name: 89053065
Synonym: Jann_0574
Alternate gene names: NA
Gene position: 563416-564243 (Clockwise)
Preceding gene: 89053064
Following gene: 89053066
Centisome position: 13.05
GC content: 62.08
Gene sequence:
>828_bases ATGGCTGAGGGTGTTCAGGTCCAGGGGTTGTGCCGCTTCTCGTTCCCCTGCACGGGCGGGTTCAAGAAGTACCACGAGAG CCTGGAAGAGCGGCGCACAGCCTTGTATGCGCCCAAACGTCTTGATGAGAGGACTTTGTGGTTCGAGCATATCTTCCTTC CTCCTCTGCACGCGCAGACGGACGACGATTTCTCCCTGCATCTGCTGTTGGGGGAAGACCTGCCCGACCCGTGGCGATCC CGGGTGGAAACCGCGATTAAAGACATCCCCCAGATCACCCCCCATTGGCGCGCGCCGGGTGATCATCGGGCGATTTGCCG GGACGTGATGTGGGGCGGGCGCGATGGCAGCCGCGCCACGGTGGCGGAGTTTCGGCTGGATGACGATGACGCAGTCGCCG TGGATTATGTCCAGCAGCTGCGGCGCGCCTGGGGCAAGCTTTCGCGGTTGACGAACACCCATGGCCGCGTGGCGCTGGAC CATGGCAAGGGCATGGTGCTGGAAGCGCAGCCAGACCGCTCCATCACGCCCCATGTGCTGAATACGCATTGCTGGTCCGC AGGGCTGGCTATCTATCTTAGGCCCGATGATGAGGCGATCATCATGGACTTCCCGCATCACAAGATCTGGTCCCGCGTGC CGTTCGTGAACCTGACAGATTCGGTGATGTTCATTCGCGGTGATCACGCCCATAACGACGCGAAGACGCCCTTCGGCGCG GGCCTGCCCGTCCCGGTGCCCGATGATGAGATTGCGACTTTGATCCAAAGGCGGTTCGCGATTGATTTTCCAGCATTCCA AGCGGACTGGCGGACGCGGGGCGGCTAG
Upstream 100 bases:
>100_bases TTGGTTTTCGCGGAACTACCCAACACCCTGGCCCTGTGCGGGGCGGCGATTGTTGTTGCGACGGGCGTGTTCACGCTCAT CCGCGAAAGACAGGTGAAAC
Downstream 100 bases:
>100_bases GCCGGGGTGCTGTTGACAGCACAGGATCAACCCCTTATACGCCGCGCATCTGGCTAGGCCGTGATCCACGTCCCGTAATG CCAAACTACTTTCTGAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MAEGVQVQGLCRFSFPCTGGFKKYHESLEERRTALYAPKRLDERTLWFEHIFLPPLHAQTDDDFSLHLLLGEDLPDPWRS RVETAIKDIPQITPHWRAPGDHRAICRDVMWGGRDGSRATVAEFRLDDDDAVAVDYVQQLRRAWGKLSRLTNTHGRVALD HGKGMVLEAQPDRSITPHVLNTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVPFVNLTDSVMFIRGDHAHNDAKTPFGA GLPVPVPDDEIATLIQRRFAIDFPAFQADWRTRGG
Sequences:
>Translated_275_residues MAEGVQVQGLCRFSFPCTGGFKKYHESLEERRTALYAPKRLDERTLWFEHIFLPPLHAQTDDDFSLHLLLGEDLPDPWRS RVETAIKDIPQITPHWRAPGDHRAICRDVMWGGRDGSRATVAEFRLDDDDAVAVDYVQQLRRAWGKLSRLTNTHGRVALD HGKGMVLEAQPDRSITPHVLNTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVPFVNLTDSVMFIRGDHAHNDAKTPFGA GLPVPVPDDEIATLIQRRFAIDFPAFQADWRTRGG >Mature_274_residues AEGVQVQGLCRFSFPCTGGFKKYHESLEERRTALYAPKRLDERTLWFEHIFLPPLHAQTDDDFSLHLLLGEDLPDPWRSR VETAIKDIPQITPHWRAPGDHRAICRDVMWGGRDGSRATVAEFRLDDDDAVAVDYVQQLRRAWGKLSRLTNTHGRVALDH GKGMVLEAQPDRSITPHVLNTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVPFVNLTDSVMFIRGDHAHNDAKTPFGAG LPVPVPDDEIATLIQRRFAIDFPAFQADWRTRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31315; Mature: 31184
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGVQVQGLCRFSFPCTGGFKKYHESLEERRTALYAPKRLDERTLWFEHIFLPPLHAQT CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC DDDFSLHLLLGEDLPDPWRSRVETAIKDIPQITPHWRAPGDHRAICRDVMWGGRDGSRAT CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE VAEFRLDDDDAVAVDYVQQLRRAWGKLSRLTNTHGRVALDHGKGMVLEAQPDRSITPHVL EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCHH NTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVPFVNLTDSVMFIRGDHAHNDAKTPFGA HCCHHCCCEEEEECCCCCEEEEECCCHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCC GLPVPVPDDEIATLIQRRFAIDFPAFQADWRTRGG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure AEGVQVQGLCRFSFPCTGGFKKYHESLEERRTALYAPKRLDERTLWFEHIFLPPLHAQT CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC DDDFSLHLLLGEDLPDPWRSRVETAIKDIPQITPHWRAPGDHRAICRDVMWGGRDGSRAT CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE VAEFRLDDDDAVAVDYVQQLRRAWGKLSRLTNTHGRVALDHGKGMVLEAQPDRSITPHVL EEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCCHH NTHCWSAGLAIYLRPDDEAIIMDFPHHKIWSRVPFVNLTDSVMFIRGDHAHNDAKTPFGA HCCHHCCCEEEEECCCCCEEEEECCCHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCC GLPVPVPDDEIATLIQRRFAIDFPAFQADWRTRGG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA