Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is sam [H]

Identifier: 89053064

GI number: 89053064

Start: 562557

End: 563423

Strand: Direct

Name: sam [H]

Synonym: Jann_0573

Alternate gene names: 89053064

Gene position: 562557-563423 (Clockwise)

Preceding gene: 89053063

Following gene: 89053065

Centisome position: 13.03

GC content: 62.28

Gene sequence:

>867_bases
ATGACGCCAAATCTGAAGGGTGCCCTGTTCATGACGGGCTCCATGGCATCGTTTGTGTTGAACGATGTGGTGATCAAGGT
CCTGTCCGATGACTTGCCGCTGTTCCAGATCGTGTTCCTGCGCGGCATCCTGACGACTGCGCTCTTGACCGCCACGGTGG
CCGCCTTCGGTCAACTGAGTTTCCGTGTCCCGCGCGGGGATCGGGGCAAGGTTGTCCTGCGCACGATCTTTGAGATCGCG
GCGATGGTCACGTTCCTGACGGCCCTGATCAACATGCAGATCGCCAATGCCACGGCGATCCTGTCGGCATTGCCCCTTGC
CGTGACCCTGGGCGCGGCCCTGCTGTTCAAGGAACAGGTCGGTTGGCGACGGTGGAGCGCCATCTGCATCGGCGCGTTTG
GCGTGTTGCTGATCGTCCAGCCAGGGGCGGACGGGTTCAACGTCTACTCCCTTCTGGCGTTGATCACGGTTGTGCTGGTC
GCGGGCCGTGACCTTGCAACACGCGGGTTTTCGACCGGGTTGCCGACCATGACCGTCGCCGTCATCACCGCCGCCGCCAT
CTGTGTGTTCGGCGGTGTCATGTCCCTGACGGACGAGTGGGTGAGACCCGCCCTCCCGCACCTGCTTCTTCTGGCGGCCG
CGTCGGTCTGTATCATCGGCGGCTATGTCTTTTCCATCCTCGTGATGCGGGTGGGAGAGGTCGCCGTGACGGCTCCGTTC
CGCTATACGTCGCTGGTGTTCGCGCTGGTTTTGGGATGGTTGGTTTTCGCGGAACTACCCAACACCCTGGCCCTGTGCGG
GGCGGCGATTGTTGTTGCGACGGGCGTGTTCACGCTCATCCGCGAAAGACAGGTGAAACATGGCTGA

Upstream 100 bases:

>100_bases
GGCTACTGTCCACCATGGATAGGGTGCACGGCGGCACGGATGCCGCACGGCAATGGGCGGCGGAGACCCGCGAAGATCCT
TTCGGGAAGGACGGCGACGC

Downstream 100 bases:

>100_bases
GGGTGTTCAGGTCCAGGGGTTGTGCCGCTTCTCGTTCCCCTGCACGGGCGGGTTCAAGAAGTACCACGAGAGCCTGGAAG
AGCGGCGCACAGCCTTGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIA
AMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLV
AGRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF
RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG

Sequences:

>Translated_288_residues
MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIA
AMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLV
AGRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF
RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG
>Mature_287_residues
TPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIAA
MVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVA
GRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPFR
YTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30496; Mature: 30365

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLS
CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FRVPRGDRGKVVLRTIFEIAAMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVAGRDLATRGFSTGLPTMTVA
CHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
VITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLS
CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
FRVPRGDRGKVVLRTIFEIAAMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQV
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVAGRDLATRGFSTGLPTMTVA
CHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
VITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH
RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA