| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89053064
GI number: 89053064
Start: 562557
End: 563423
Strand: Direct
Name: sam [H]
Synonym: Jann_0573
Alternate gene names: 89053064
Gene position: 562557-563423 (Clockwise)
Preceding gene: 89053063
Following gene: 89053065
Centisome position: 13.03
GC content: 62.28
Gene sequence:
>867_bases ATGACGCCAAATCTGAAGGGTGCCCTGTTCATGACGGGCTCCATGGCATCGTTTGTGTTGAACGATGTGGTGATCAAGGT CCTGTCCGATGACTTGCCGCTGTTCCAGATCGTGTTCCTGCGCGGCATCCTGACGACTGCGCTCTTGACCGCCACGGTGG CCGCCTTCGGTCAACTGAGTTTCCGTGTCCCGCGCGGGGATCGGGGCAAGGTTGTCCTGCGCACGATCTTTGAGATCGCG GCGATGGTCACGTTCCTGACGGCCCTGATCAACATGCAGATCGCCAATGCCACGGCGATCCTGTCGGCATTGCCCCTTGC CGTGACCCTGGGCGCGGCCCTGCTGTTCAAGGAACAGGTCGGTTGGCGACGGTGGAGCGCCATCTGCATCGGCGCGTTTG GCGTGTTGCTGATCGTCCAGCCAGGGGCGGACGGGTTCAACGTCTACTCCCTTCTGGCGTTGATCACGGTTGTGCTGGTC GCGGGCCGTGACCTTGCAACACGCGGGTTTTCGACCGGGTTGCCGACCATGACCGTCGCCGTCATCACCGCCGCCGCCAT CTGTGTGTTCGGCGGTGTCATGTCCCTGACGGACGAGTGGGTGAGACCCGCCCTCCCGCACCTGCTTCTTCTGGCGGCCG CGTCGGTCTGTATCATCGGCGGCTATGTCTTTTCCATCCTCGTGATGCGGGTGGGAGAGGTCGCCGTGACGGCTCCGTTC CGCTATACGTCGCTGGTGTTCGCGCTGGTTTTGGGATGGTTGGTTTTCGCGGAACTACCCAACACCCTGGCCCTGTGCGG GGCGGCGATTGTTGTTGCGACGGGCGTGTTCACGCTCATCCGCGAAAGACAGGTGAAACATGGCTGA
Upstream 100 bases:
>100_bases GGCTACTGTCCACCATGGATAGGGTGCACGGCGGCACGGATGCCGCACGGCAATGGGCGGCGGAGACCCGCGAAGATCCT TTCGGGAAGGACGGCGACGC
Downstream 100 bases:
>100_bases GGGTGTTCAGGTCCAGGGGTTGTGCCGCTTCTCGTTCCCCTGCACGGGCGGGTTCAAGAAGTACCACGAGAGCCTGGAAG AGCGGCGCACAGCCTTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIA AMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLV AGRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG
Sequences:
>Translated_288_residues MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIA AMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLV AGRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG >Mature_287_residues TPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLSFRVPRGDRGKVVLRTIFEIAA MVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQVGWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVA GRDLATRGFSTGLPTMTVAVITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPFR YTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 30496; Mature: 30365
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLS CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE FRVPRGDRGKVVLRTIFEIAAMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQV EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVAGRDLATRGFSTGLPTMTVA CHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH VITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPNLKGALFMTGSMASFVLNDVVIKVLSDDLPLFQIVFLRGILTTALLTATVAAFGQLS CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE FRVPRGDRGKVVLRTIFEIAAMVTFLTALINMQIANATAILSALPLAVTLGAALLFKEQV EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWRRWSAICIGAFGVLLIVQPGADGFNVYSLLALITVVLVAGRDLATRGFSTGLPTMTVA CHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH VITAAAICVFGGVMSLTDEWVRPALPHLLLLAAASVCIIGGYVFSILVMRVGEVAVTAPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCH RYTSLVFALVLGWLVFAELPNTLALCGAAIVVATGVFTLIRERQVKHG HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA