Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053045

Identifier: 89053045

GI number: 89053045

Start: 542847

End: 543524

Strand: Direct

Name: 89053045

Synonym: Jann_0554

Alternate gene names: NA

Gene position: 542847-543524 (Clockwise)

Preceding gene: 89053044

Following gene: 89053046

Centisome position: 12.57

GC content: 62.09

Gene sequence:

>678_bases
ATGTTTCGCCTGGCCCGTTTTGCCCCCTTGGCATTGATCACGACCCTTGTCGCTTGTGCTGCCGGGGACCCCTTGGAAGA
AGAGTTGCCGCCCATGGGTGACTTCCGCCTGGCCCACAACATCGTGGTTGCCGAGAATATGCAGCAGGTTCCGCCCTCGC
GGAATGCCACGCCCGAGGAGTGGCAGGAGATCCTGGAATCCGAGATTGATCGCCGGTTCCGCGGTTATGAGGGAGATCGC
CTTTACCACATCGGTGTCGCCGTTGACGGCTATGCGCTGGCCCCTCCCGGCATTCCGATCGTGCTGAGCCCACGCTCCAT
TTTGGTCCTGTCGGTGAATATCTGGGACGATGAATTGGGTCGGAAGCTCCATGAGGAAGCCGAGCAGATCATCGTGTTTG
AGGGCTCCAGCCCCGAGACGTTGCTGGTGGGCTCGGGCATCGCCCGCAACCGCAACGAGCAGATGCAAATCCTGGCCCGC
AACGCCGCGCGCCGCATTCAACTCTTCATGCTGGAAAACCCGGAGTGGTTTAACATCTCGGAAGAAGAGGCAGCGGCTGC
CGTCAGCGGTGTCGAGGCGTTGGCCGAAGCCGCAGAGGCCGAGGCTGCGATTGAAGCGGCCGCCGCCGAATGCGAACCGA
CAGCCACCGCCCCCTGTCCGGAGCTGCCAAACAACTGA

Upstream 100 bases:

>100_bases
CTTTTGGTAACACTTCGTCTCACCTGGCATGCAACGCCTTTACCCCAGACCGCCGCGACCGTAACTTCTGCCGAAACCCA
GACCTTCAGGAGACCGACCG

Downstream 100 bases:

>100_bases
GCCGATGACATTGACGGCTTGATTTCTCTGGCCATCCCGAATACTTCGCCCGCGATGATGAACCGGTTGGTGCCTCGCAG
CGAGGCGCAGACCCTCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MFRLARFAPLALITTLVACAAGDPLEEELPPMGDFRLAHNIVVAENMQQVPPSRNATPEEWQEILESEIDRRFRGYEGDR
LYHIGVAVDGYALAPPGIPIVLSPRSILVLSVNIWDDELGRKLHEEAEQIIVFEGSSPETLLVGSGIARNRNEQMQILAR
NAARRIQLFMLENPEWFNISEEEAAAAVSGVEALAEAAEAEAAIEAAAAECEPTATAPCPELPNN

Sequences:

>Translated_225_residues
MFRLARFAPLALITTLVACAAGDPLEEELPPMGDFRLAHNIVVAENMQQVPPSRNATPEEWQEILESEIDRRFRGYEGDR
LYHIGVAVDGYALAPPGIPIVLSPRSILVLSVNIWDDELGRKLHEEAEQIIVFEGSSPETLLVGSGIARNRNEQMQILAR
NAARRIQLFMLENPEWFNISEEEAAAAVSGVEALAEAAEAEAAIEAAAAECEPTATAPCPELPNN
>Mature_225_residues
MFRLARFAPLALITTLVACAAGDPLEEELPPMGDFRLAHNIVVAENMQQVPPSRNATPEEWQEILESEIDRRFRGYEGDR
LYHIGVAVDGYALAPPGIPIVLSPRSILVLSVNIWDDELGRKLHEEAEQIIVFEGSSPETLLVGSGIARNRNEQMQILAR
NAARRIQLFMLENPEWFNISEEEAAAAVSGVEALAEAAEAEAAIEAAAAECEPTATAPCPELPNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24594; Mature: 24594

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLARFAPLALITTLVACAAGDPLEEELPPMGDFRLAHNIVVAENMQQVPPSRNATPEE
CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHEEEECCHHHCCCCCCCCHHH
WQEILESEIDRRFRGYEGDRLYHIGVAVDGYALAPPGIPIVLSPRSILVLSVNIWDDELG
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCHHHH
RKLHEEAEQIIVFEGSSPETLLVGSGIARNRNEQMQILARNAARRIQLFMLENPEWFNIS
HHHHHHHCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCC
EEEAAAAVSGVEALAEAAEAEAAIEAAAAECEPTATAPCPELPNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRLARFAPLALITTLVACAAGDPLEEELPPMGDFRLAHNIVVAENMQQVPPSRNATPEE
CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHEEEECCHHHCCCCCCCCHHH
WQEILESEIDRRFRGYEGDRLYHIGVAVDGYALAPPGIPIVLSPRSILVLSVNIWDDELG
HHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEECCCCCEEEECCCEEEEEEEECCCHHHH
RKLHEEAEQIIVFEGSSPETLLVGSGIARNRNEQMQILARNAARRIQLFMLENPEWFNIS
HHHHHHHCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCC
EEEAAAAVSGVEALAEAAEAEAAIEAAAAECEPTATAPCPELPNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA