Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053039

Identifier: 89053039

GI number: 89053039

Start: 536888

End: 537757

Strand: Direct

Name: 89053039

Synonym: Jann_0548

Alternate gene names: NA

Gene position: 536888-537757 (Clockwise)

Preceding gene: 89053035

Following gene: 89053044

Centisome position: 12.43

GC content: 62.53

Gene sequence:

>870_bases
ATGGCAGTAAGAACCGGATATAAGACCGCCGAATTGGCCGCGCAGGCTGAGCGGATTAAGTTGCAGGCGGCTGCCCTCGT
GGCCGATTTGCCGCGTCAGCCGCTTCAGGTTCTGGAGCTTGTCTGTGCCTGCGACCGCTGCATTGATCCGCCCGCCTATG
ACCAATTGATCCGAACGCCACCGCCGCAGCTGACCACTTACATGGTTGGGCAGTACTTCGGCGGAGCCGGTGCCGTCAAA
GTGGAGACGGGCATGGCCGAGCAGCGTGAGGCTCGCATCATTCTGACCCATGTTCTGGCCCATCTGGGAGAGGCCGTGTG
CCGGTCGCGAGAGGAGGAGCGCAAATATTACCGCCAGGCCTATTTCATCGAGCCCGCCTACTGGATCGAGGGGCTGTTCA
GGACCGGTGTCATCGATACACTCTCCCACGAGGTGGCGACCCAGATCCGTGTCTACCTGATGGAGGTCGTGACCCACGCA
TCCGCGAAAGGCTCGGCGCGTTTGAATGATGCGTTGACCTATCTGGCTTTGGCGACGACAGCGTTGCCGGATGTGTTGGA
GCGGTATCGCACGGGCCCGTCCAGGCGGCATCTGAGGTTCTGGACGTCCGTTGCGGGTGGGCTCGTGCAGCGCGGCCCCG
ATGGGCAAAACCCGCGCGGTGTCGACCTGTACAAATGGTTTGACGCCATGCCCGAACCGGCGGTCGAGACGTTGGTTCTG
GCCCTTGATCATCCGGACACCGAGCGGATGATGGAACGCTATGCCCTGGCCGCTCAGGACCGCGACTGGCTGACCTACCT
GTCGCGCTTGATGCAGTGGCGCGAGGCGACGCTGGCGCAGAGCTTCTTTTCAGACCGGGTTGGGCGGTAG

Upstream 100 bases:

>100_bases
ACAAACCCAGAAATTATAGAAAACAAACTGTTATCACTTCGTGATCTGTTGCGTTTGCGTCTTGTGAGGGCGCTGGGGCA
GATGCAGACTGGCGCTCGGG

Downstream 100 bases:

>100_bases
GTCCATCACCGGTTCGCGCGTTGCCTATCTGGTTGCCATGACGTTCACCAACTTTAGAGGTTCGCTCTTCCCGTCGCCAC
ACGCGGTGCGTCCGCCGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAVRTGYKTAELAAQAERIKLQAAALVADLPRQPLQVLELVCACDRCIDPPAYDQLIRTPPPQLTTYMVGQYFGGAGAVK
VETGMAEQREARIILTHVLAHLGEAVCRSREEERKYYRQAYFIEPAYWIEGLFRTGVIDTLSHEVATQIRVYLMEVVTHA
SAKGSARLNDALTYLALATTALPDVLERYRTGPSRRHLRFWTSVAGGLVQRGPDGQNPRGVDLYKWFDAMPEPAVETLVL
ALDHPDTERMMERYALAAQDRDWLTYLSRLMQWREATLAQSFFSDRVGR

Sequences:

>Translated_289_residues
MAVRTGYKTAELAAQAERIKLQAAALVADLPRQPLQVLELVCACDRCIDPPAYDQLIRTPPPQLTTYMVGQYFGGAGAVK
VETGMAEQREARIILTHVLAHLGEAVCRSREEERKYYRQAYFIEPAYWIEGLFRTGVIDTLSHEVATQIRVYLMEVVTHA
SAKGSARLNDALTYLALATTALPDVLERYRTGPSRRHLRFWTSVAGGLVQRGPDGQNPRGVDLYKWFDAMPEPAVETLVL
ALDHPDTERMMERYALAAQDRDWLTYLSRLMQWREATLAQSFFSDRVGR
>Mature_288_residues
AVRTGYKTAELAAQAERIKLQAAALVADLPRQPLQVLELVCACDRCIDPPAYDQLIRTPPPQLTTYMVGQYFGGAGAVKV
ETGMAEQREARIILTHVLAHLGEAVCRSREEERKYYRQAYFIEPAYWIEGLFRTGVIDTLSHEVATQIRVYLMEVVTHAS
AKGSARLNDALTYLALATTALPDVLERYRTGPSRRHLRFWTSVAGGLVQRGPDGQNPRGVDLYKWFDAMPEPAVETLVLA
LDHPDTERMMERYALAAQDRDWLTYLSRLMQWREATLAQSFFSDRVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32663; Mature: 32532

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVRTGYKTAELAAQAERIKLQAAALVADLPRQPLQVLELVCACDRCIDPPAYDQLIRTP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
PPQLTTYMVGQYFGGAGAVKVETGMAEQREARIILTHVLAHLGEAVCRSREEERKYYRQA
CCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
YFIEPAYWIEGLFRTGVIDTLSHEVATQIRVYLMEVVTHASAKGSARLNDALTYLALATT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALPDVLERYRTGPSRRHLRFWTSVAGGLVQRGPDGQNPRGVDLYKWFDAMPEPAVETLVL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
ALDHPDTERMMERYALAAQDRDWLTYLSRLMQWREATLAQSFFSDRVGR
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVRTGYKTAELAAQAERIKLQAAALVADLPRQPLQVLELVCACDRCIDPPAYDQLIRTP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
PPQLTTYMVGQYFGGAGAVKVETGMAEQREARIILTHVLAHLGEAVCRSREEERKYYRQA
CCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
YFIEPAYWIEGLFRTGVIDTLSHEVATQIRVYLMEVVTHASAKGSARLNDALTYLALATT
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ALPDVLERYRTGPSRRHLRFWTSVAGGLVQRGPDGQNPRGVDLYKWFDAMPEPAVETLVL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHH
ALDHPDTERMMERYALAAQDRDWLTYLSRLMQWREATLAQSFFSDRVGR
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA