Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053002

Identifier: 89053002

GI number: 89053002

Start: 505711

End: 506286

Strand: Reverse

Name: 89053002

Synonym: Jann_0511

Alternate gene names: NA

Gene position: 506286-505711 (Counterclockwise)

Preceding gene: 89053014

Following gene: 89053000

Centisome position: 11.73

GC content: 57.47

Gene sequence:

>576_bases
ATGTTTTACCGAGACGAACGTCTTGCGCTGTTTATCGACGGCTCCAACCTCTATGCGGCGGCAAAGGCGCTGGGGTTTGA
CATCGATTACAAACTTTTGCGGTCAGAATTCATGCAGCGCGGCAAATTACTGCGGGCGAACTATTATACCGCGCTTTTGG
AAAATGATGACTATTCCCCGATCCGGCCGCTGGTCGATTGGCTGCATTACAACGGCTTCAACATGGTCACGAAACCCGCC
AAGGAATTCGTGGACAGCCAGGGTCGCCGCAAGGTGAAGGGGAACATGGATATCGAACTGGCCGTCGACGCGATGGAAAC
CGCGCCCCATGTCGACCACATCGTGATCTTCTCCGGCGATGGTGACTTCCGTCCGCTGGTCGAATCGCTGCAACGCAAGG
GATGCCGGGTATCCGTCGTCTCCACGATCCGCAGCCAACCGCCGATGATCGCCGACGACCTGCGCCGCCAATGCGATAAT
TTTATCGAACTTCTGGACCTCAAAGAGGCCATTGGCCGTCCCCCACGGGAACCCCGGCCCGAGCCGTCGGCCCAGATCGA
AGTGGTTGCCGACTAA

Upstream 100 bases:

>100_bases
TTACATACAAACTTGCCAGCTCGCACTGGAGGCCGCCGGATGGGACCGGAATTTTTAGGCCAACGGTGCAATACACTCAC
TCACGGGCATTGGATACAAC

Downstream 100 bases:

>100_bases
AGACCTGACGGATGGTCCCCGGCGCGAGTCGCTTGGCCGAGCGTCCATAGGCCAGCGGCGGCAAGCATCATCGCGACCCC
GGATGCCAGCGTCCGGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA
KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN
FIELLDLKEAIGRPPREPRPEPSAQIEVVAD

Sequences:

>Translated_191_residues
MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA
KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN
FIELLDLKEAIGRPPREPRPEPSAQIEVVAD
>Mature_191_residues
MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSPIRPLVDWLHYNGFNMVTKPA
KEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDN
FIELLDLKEAIGRPPREPRPEPSAQIEVVAD

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21834; Mature: 21834

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSP
CCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHEEEEECCCCCCH
IRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGD
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHCCCCCCEEEEECCC
GDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIGRPPREPRP
CCHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPSAQIEVVAD
CCCCCEEEEEC
>Mature Secondary Structure
MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDDYSP
CCCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHEEEEECCCCCCH
IRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFSGD
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEEHHHCCCCCCEEEEECCC
GDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIGRPPREPRP
CCHHHHHHHHHHCCCEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EPSAQIEVVAD
CCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA