| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052971
Identifier: 89052971
GI number: 89052971
Start: 476812
End: 479364
Strand: Reverse
Name: 89052971
Synonym: Jann_0480
Alternate gene names: NA
Gene position: 479364-476812 (Counterclockwise)
Preceding gene: 89052972
Following gene: 89052969
Centisome position: 11.1
GC content: 65.22
Gene sequence:
>2553_bases ATGACCGAGGACAACGCCAATACCGGGCCAAAAACTGACGCGATCAGGTGGCTGATCTGGCCGCTGCGGCTGACCCGTCT TGGCATGGCGGCGGAGCGGTTCGTGCGTGCCTTCTGGCCGGTCTGGACGCTGGCCTTCGTGGCCTTCGCGGCCCTCGCGT TTGGTACGGGCACCCTTGCCAGCCCGACAACGGTTTGGTCCGGTCTGGCCCTTGTTTCACTGGCCCTTGTCGTGTTGGTG TTTGTGGGAATCCGTCGCTTCAAGATGCCGTCTCATCAAGACGCATTGGAACGGCTCGACGCCACAATGCCAGGCCGGCC CATCACCACTTTGCTGGACACGCCCGCTGTCGGCGGCAGCGATCCGGCCAGCCAATCGGTCTGGGCTGTGCATGTGGCGC GCATGGCCAACCGCGCCGCGTCAGCCCGCGCGCCGCAACCCGATCTGCGCGTCTCCCGCAACGATCCCTACGCTCTGCGC TACATCGGCGTGACCGCGATCGCCATGGCGCTGCTCTTCGGTGGGCTGTCCCGCGTCACCGAAGTGGGCGAGGTTCCGCT TGGCCCGGGTGCTGCCACGGCTGCCGCCGGACCATCCTGGGAAGGCTGGGTGGAGCCGCCGATCTACACCGGCCTGCCAT CGCTTTACCTCAACGATATCACCGCCGACACGTTTGAGGCTCCGTTGGGTTCTGACATCACATTGCGGGCGTATGGCGCG CCCGGTGAAATCACGCTGCGCACCGACATCGGCCCTGTGCCCGAGCTGGACGATGGCGCATATGCCCAAACCGTGACGAT GGAACGCGGCGGCACGCTGGCCGTGGATGGCCCCGGCGGTCGTGAATGGCAGGTGGCCGTGCGCCCCGATCAGCCACCCA CCGTTGCGCTTGAGGGCGAGGTGGAGGGCGAGCCCCCCAGCGCCATGCAGTTCAGCTTCACTGCCAGCGATGACTATGGC GTTCGCTCCGGCACCGCCACGATCCGCCTGAACCCTGTGGCGGCTGACCGCCGTTTTGGCCTTGCCGTCGATCCCGAACC CCGCGAGCCGGTGGTGCTTGACCTGCCGATGCCCTTCCGCGGCAACCGTGATGAATTCACTGAAGTCGTGCTGGAAGACC TGTCTGAACATCCCTTCGCCAACCTGCCGGTCACGCTGACCCTGACCGTCACGGACGACGCAGGCCAAATCGCGACCGTA TCCTACGACGTGGCCCGCCTGCCCGGTCAACGCTTCTTCGATCCCCTCGCCAATGCGCTGATCGAGATGCGGCGCGATAT CCTGTGGAACCGGGAGAATGCGACCCGGTCCGCGCGCCTTCTGCGGGCGCTGACCCACCGGCCTGAAGACGGGCTTGAGG AAGGCGTCTATCTTGGCCTTCGCTCCGCCATTCAACGGTTGGAAGCGGCCATTGATATGATTTCCTTCGAGACGCAGGAA GATGTTGCCGAAATCCTCTGGAATGCCGCGCTTGAGTTGGAATTCGGCGATCTCGACAGCGCGTTGGAGCGCCTTCGCCG TGCGCAGGAGCGGCTGGAAGAGGCCATGCGCCAGGGCGCATCGGATGAGGAAATCGCGCAGCTGATGCAGGAAATGCGCG AGGCGATGGACGAGTACATGCAGGAGCTCGCCGATAATACCGAGTTTGGCGACGACACCGACCAACCCGACGAGGGCGAG CGCCAGGAGATGTCAAACGCGGATCTCGACGAGATGCTGCGCCGGATCGAAGAGCTGATGCAGGAAGGCCGCATGGCCGA GGCGATGGAGATGCTTCAGGCCTTGCAGGAGATGCTGGAAAACATGGAAATCACCCAGGGCGAAGGCGGTGGTGATGGCC CCCAGACGCCCGGACAGGAGGCCATGGAAGGCCTGCAAGAGACCCTGCGCGGGCAGCAGGAATTGAGCGACGATTCGTTC CAGGAACTACAGGATCAGTTCAACCCCAACCGCCCCGGCCAGCAGAGCGAACAACAGGGCAATGCGCCCCAGGGCAACCA GCCAGGCCAGGAGGGCCAGAACCCCGGTGACATCGCGGGTGGTGATAGCGGCCAGGGGTCCCTTGCGGAACGGCAGCAGG AATTGCTGCGTCAGCTCGAAGAGCAGGCCCGCCGCCTTCCCGGCACCGGCACGGAAGCGGGTGACGAAGCGCTGGAGCAG CTCGACGGTGCGGGTCGCGCCATGGATGAGGCCGCCGAAGCGCTGGAGCGTGGCGGTATCGCCGAGGCGTTGGATCTTCA GTCCGAGGCGATGGAAGCCCTCCGCGAAGGTATGACGCAACTCAGTGAGGCGCTGGCCCAGGAACAGGGCGCAGAACCGG GCCAAGGGCCAGCCGAGGGCAATATGGCCGAAAGCCGTCCGATGCAGGATCCGCTGGGTCGGCAAGCCGGAAACAATGGC GCGCTTGGCTCGGACGAGGATGGTTTGGGCGATGGTGTGGATGCCCGCGAACGGGCGCGTGAGTTGCTGGACCTGCTGCG GGACCGCGCCGCCGAACAGACTCGCCCCGAGATCGAGCGGGATTACCTGCGCCGCCTTCTGGATCAGTTCTGA
Upstream 100 bases:
>100_bases GCCGTCATCCGCGCGCGTCCATCGTTTGACGACATGATAAACCGCGATACACTCCCCCAATGGATGTAGTGCGCGCTGGC GCCCTGGCAGATGGACCCAC
Downstream 100 bases:
>100_bases GGAACTGGAGCTGTCCGGGTCACGCTGGATTCTGGCCTAGTTGCCCGTTTCACCGGCCAGAGATCGGGCCATATCATCCA GCCAGAAGCGCGCGGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 850; Mature: 849
Protein sequence:
>850_residues MTEDNANTGPKTDAIRWLIWPLRLTRLGMAAERFVRAFWPVWTLAFVAFAALAFGTGTLASPTTVWSGLALVSLALVVLV FVGIRRFKMPSHQDALERLDATMPGRPITTLLDTPAVGGSDPASQSVWAVHVARMANRAASARAPQPDLRVSRNDPYALR YIGVTAIAMALLFGGLSRVTEVGEVPLGPGAATAAAGPSWEGWVEPPIYTGLPSLYLNDITADTFEAPLGSDITLRAYGA PGEITLRTDIGPVPELDDGAYAQTVTMERGGTLAVDGPGGREWQVAVRPDQPPTVALEGEVEGEPPSAMQFSFTASDDYG VRSGTATIRLNPVAADRRFGLAVDPEPREPVVLDLPMPFRGNRDEFTEVVLEDLSEHPFANLPVTLTLTVTDDAGQIATV SYDVARLPGQRFFDPLANALIEMRRDILWNRENATRSARLLRALTHRPEDGLEEGVYLGLRSAIQRLEAAIDMISFETQE DVAEILWNAALELEFGDLDSALERLRRAQERLEEAMRQGASDEEIAQLMQEMREAMDEYMQELADNTEFGDDTDQPDEGE RQEMSNADLDEMLRRIEELMQEGRMAEAMEMLQALQEMLENMEITQGEGGGDGPQTPGQEAMEGLQETLRGQQELSDDSF QELQDQFNPNRPGQQSEQQGNAPQGNQPGQEGQNPGDIAGGDSGQGSLAERQQELLRQLEEQARRLPGTGTEAGDEALEQ LDGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEALAQEQGAEPGQGPAEGNMAESRPMQDPLGRQAGNNG ALGSDEDGLGDGVDARERARELLDLLRDRAAEQTRPEIERDYLRRLLDQF
Sequences:
>Translated_850_residues MTEDNANTGPKTDAIRWLIWPLRLTRLGMAAERFVRAFWPVWTLAFVAFAALAFGTGTLASPTTVWSGLALVSLALVVLV FVGIRRFKMPSHQDALERLDATMPGRPITTLLDTPAVGGSDPASQSVWAVHVARMANRAASARAPQPDLRVSRNDPYALR YIGVTAIAMALLFGGLSRVTEVGEVPLGPGAATAAAGPSWEGWVEPPIYTGLPSLYLNDITADTFEAPLGSDITLRAYGA PGEITLRTDIGPVPELDDGAYAQTVTMERGGTLAVDGPGGREWQVAVRPDQPPTVALEGEVEGEPPSAMQFSFTASDDYG VRSGTATIRLNPVAADRRFGLAVDPEPREPVVLDLPMPFRGNRDEFTEVVLEDLSEHPFANLPVTLTLTVTDDAGQIATV SYDVARLPGQRFFDPLANALIEMRRDILWNRENATRSARLLRALTHRPEDGLEEGVYLGLRSAIQRLEAAIDMISFETQE DVAEILWNAALELEFGDLDSALERLRRAQERLEEAMRQGASDEEIAQLMQEMREAMDEYMQELADNTEFGDDTDQPDEGE RQEMSNADLDEMLRRIEELMQEGRMAEAMEMLQALQEMLENMEITQGEGGGDGPQTPGQEAMEGLQETLRGQQELSDDSF QELQDQFNPNRPGQQSEQQGNAPQGNQPGQEGQNPGDIAGGDSGQGSLAERQQELLRQLEEQARRLPGTGTEAGDEALEQ LDGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEALAQEQGAEPGQGPAEGNMAESRPMQDPLGRQAGNNG ALGSDEDGLGDGVDARERARELLDLLRDRAAEQTRPEIERDYLRRLLDQF >Mature_849_residues TEDNANTGPKTDAIRWLIWPLRLTRLGMAAERFVRAFWPVWTLAFVAFAALAFGTGTLASPTTVWSGLALVSLALVVLVF VGIRRFKMPSHQDALERLDATMPGRPITTLLDTPAVGGSDPASQSVWAVHVARMANRAASARAPQPDLRVSRNDPYALRY IGVTAIAMALLFGGLSRVTEVGEVPLGPGAATAAAGPSWEGWVEPPIYTGLPSLYLNDITADTFEAPLGSDITLRAYGAP GEITLRTDIGPVPELDDGAYAQTVTMERGGTLAVDGPGGREWQVAVRPDQPPTVALEGEVEGEPPSAMQFSFTASDDYGV RSGTATIRLNPVAADRRFGLAVDPEPREPVVLDLPMPFRGNRDEFTEVVLEDLSEHPFANLPVTLTLTVTDDAGQIATVS YDVARLPGQRFFDPLANALIEMRRDILWNRENATRSARLLRALTHRPEDGLEEGVYLGLRSAIQRLEAAIDMISFETQED VAEILWNAALELEFGDLDSALERLRRAQERLEEAMRQGASDEEIAQLMQEMREAMDEYMQELADNTEFGDDTDQPDEGER QEMSNADLDEMLRRIEELMQEGRMAEAMEMLQALQEMLENMEITQGEGGGDGPQTPGQEAMEGLQETLRGQQELSDDSFQ ELQDQFNPNRPGQQSEQQGNAPQGNQPGQEGQNPGDIAGGDSGQGSLAERQQELLRQLEEQARRLPGTGTEAGDEALEQL DGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEALAQEQGAEPGQGPAEGNMAESRPMQDPLGRQAGNNGA LGSDEDGLGDGVDARERARELLDLLRDRAAEQTRPEIERDYLRRLLDQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92670; Mature: 92539
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEDNANTGPKTDAIRWLIWPLRLTRLGMAAERFVRAFWPVWTLAFVAFAALAFGTGTLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPTTVWSGLALVSLALVVLVFVGIRRFKMPSHQDALERLDATMPGRPITTLLDTPAVGGS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCC DPASQSVWAVHVARMANRAASARAPQPDLRVSRNDPYALRYIGVTAIAMALLFGGLSRVT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHH EVGEVPLGPGAATAAAGPSWEGWVEPPIYTGLPSLYLNDITADTFEAPLGSDITLRAYGA HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHHCCCCCCCEEEEEECC PGEITLRTDIGPVPELDDGAYAQTVTMERGGTLAVDGPGGREWQVAVRPDQPPTVALEGE CCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCCCCCEEEEECC VEGEPPSAMQFSFTASDDYGVRSGTATIRLNPVAADRRFGLAVDPEPREPVVLDLPMPFR CCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC GNRDEFTEVVLEDLSEHPFANLPVTLTLTVTDDAGQIATVSYDVARLPGQRFFDPLANAL CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHCCCHHHHHHHHHHH IEMRRDILWNRENATRSARLLRALTHRPEDGLEEGVYLGLRSAIQRLEAAIDMISFETQE HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DVAEILWNAALELEFGDLDSALERLRRAQERLEEAMRQGASDEEIAQLMQEMREAMDEYM HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QELADNTEFGDDTDQPDEGERQEMSNADLDEMLRRIEELMQEGRMAEAMEMLQALQEMLE HHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NMEITQGEGGGDGPQTPGQEAMEGLQETLRGQQELSDDSFQELQDQFNPNRPGQQSEQQG CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCC NAPQGNQPGQEGQNPGDIAGGDSGQGSLAERQQELLRQLEEQARRLPGTGTEAGDEALEQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LDGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEALAQEQGAEPGQGPAEG HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NMAESRPMQDPLGRQAGNNGALGSDEDGLGDGVDARERARELLDLLRDRAAEQTRPEIER CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DYLRRLLDQF HHHHHHHHHC >Mature Secondary Structure TEDNANTGPKTDAIRWLIWPLRLTRLGMAAERFVRAFWPVWTLAFVAFAALAFGTGTLA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SPTTVWSGLALVSLALVVLVFVGIRRFKMPSHQDALERLDATMPGRPITTLLDTPAVGGS CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCC DPASQSVWAVHVARMANRAASARAPQPDLRVSRNDPYALRYIGVTAIAMALLFGGLSRVT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHHHHHH EVGEVPLGPGAATAAAGPSWEGWVEPPIYTGLPSLYLNDITADTFEAPLGSDITLRAYGA HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHCCHHHHCCCCCCCEEEEEECC PGEITLRTDIGPVPELDDGAYAQTVTMERGGTLAVDGPGGREWQVAVRPDQPPTVALEGE CCCEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCCCCCEEEEECC VEGEPPSAMQFSFTASDDYGVRSGTATIRLNPVAADRRFGLAVDPEPREPVVLDLPMPFR CCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC GNRDEFTEVVLEDLSEHPFANLPVTLTLTVTDDAGQIATVSYDVARLPGQRFFDPLANAL CCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEHHHHHCCCHHHHHHHHHHH IEMRRDILWNRENATRSARLLRALTHRPEDGLEEGVYLGLRSAIQRLEAAIDMISFETQE HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DVAEILWNAALELEFGDLDSALERLRRAQERLEEAMRQGASDEEIAQLMQEMREAMDEYM HHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH QELADNTEFGDDTDQPDEGERQEMSNADLDEMLRRIEELMQEGRMAEAMEMLQALQEMLE HHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH NMEITQGEGGGDGPQTPGQEAMEGLQETLRGQQELSDDSFQELQDQFNPNRPGQQSEQQG CCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHCC NAPQGNQPGQEGQNPGDIAGGDSGQGSLAERQQELLRQLEEQARRLPGTGTEAGDEALEQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LDGAGRAMDEAAEALERGGIAEALDLQSEAMEALREGMTQLSEALAQEQGAEPGQGPAEG HCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NMAESRPMQDPLGRQAGNNGALGSDEDGLGDGVDARERARELLDLLRDRAAEQTRPEIER CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH DYLRRLLDQF HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA