| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052963
Identifier: 89052963
GI number: 89052963
Start: 469854
End: 471029
Strand: Direct
Name: 89052963
Synonym: Jann_0472
Alternate gene names: NA
Gene position: 469854-471029 (Clockwise)
Preceding gene: 89052962
Following gene: 89052964
Centisome position: 10.88
GC content: 61.31
Gene sequence:
>1176_bases ATGAACACATCCGTCTTTTTTGATATCGCTGCGGCCCTGGCCGTAACGGCGCTGTTGGCGGAAAGCTATGGGGCGGTCCG GCGCCGGATGGTTGGCACGAATCTCGCGCCCGTTGTTCTGGGCGTGCTGTTCGGGCTGATGGCGTTGTTGCAGATGTTCA ATCCAGTAGAACCGTATGACGGCCTGATCATTGATATGCGCAACGTGCCGATTGCACTTGCGGGGGCGTTTCTGGGGTGG CGTGGAGTGTTACCCTGCCTCGCCATCGCGTTTGCCACGCGCTACGGAATTGGCGGCGTTGGTATGCTGGCGGGCGTCGT GGGTATGACAATTGCGGGGTTGGCGGGCATAATCTGGGCGCGCCTGACGGCCCATCTAGAGCAGCGTGGCCTTGGTCTGC TGCTGCTACTGGCCGCCGCCATGTCAACGCATGTCGTATCCGGCGTCGTGGTCCCACGCGACATGGCGATCTGGTTTTTT AGCGTTGCCGCAGCCCCGATCGTCCTGGTGAACTTCCTGGCAGTCCCCCTAATCGGATCGCTGTTAGAGCGCGAGAACCG CCGCATCCAACGCGAGAATAAGTTGTCGGCGGCCATCACCCGGGATCCCGAGACGGGCTTGCTGACCGGGCCAGCCCTCG TGCGTGATCTCACAAATGCCTACGCGGCGCAGCCGTTCGGCACGTTTGCAGGCTTTCTGAAGGTGACACCGGACCGGCGA TTTTGGTCGCTGTATGGCGGGCTGTTTGGGGCCGCACATCCAAGGCCGGTTGACGCCAGCGATCTGACACAGGCCGTCGA CCATGCGGCCTTGGCGGGGACGTGCGCGGATGGCAGCGTCTTGATCCCCCTGTCCGCATGGGAAATTGAGAACATCACGC GTGTGAAAAGCGCACTACGCTCGGCGATGCGCAACAAACTCCGACAGGGGGAAACGCTCGGCTTGCTGGATATGGCTGTA ATCGAGGCTGCAGAACCTGCTGAGTTTATCCGGGTGGCCAAACGCGCCGCGCTGACGGCGCAGCCGGACTGGTCCCGTGC ACCGATGGCGGGCAAAACCCGGGCGAAGGACACGTCCCAACTGGCATCTGTCCGCCGATCCAAGATATTTAACCCTGAAG AGCATGACGTCCTGTTCGCCAAAGCCGATTTTTTGATCGACCGCAGCCATAGCTGA
Upstream 100 bases:
>100_bases AACAAGCTAAAATGATCAATAGTTAGTCGCAGGCCATTAAGGGCTTTGCAAGCATACATGTATACTGGTGTGTCCTGTAA CGAGTTGAAGGGACGCCGCC
Downstream 100 bases:
>100_bases CAGAGCGTGATCTGCTGAGTTGCATCCCTCCCCCCACGCCGCCATATATCGGAGGTCCGGCCATGATGTGAGAGCGACCT GCGATGAACTATCTCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNTSVFFDIAAALAVTALLAESYGAVRRRMVGTNLAPVVLGVLFGLMALLQMFNPVEPYDGLIIDMRNVPIALAGAFLGW RGVLPCLAIAFATRYGIGGVGMLAGVVGMTIAGLAGIIWARLTAHLEQRGLGLLLLLAAAMSTHVVSGVVVPRDMAIWFF SVAAAPIVLVNFLAVPLIGSLLERENRRIQRENKLSAAITRDPETGLLTGPALVRDLTNAYAAQPFGTFAGFLKVTPDRR FWSLYGGLFGAAHPRPVDASDLTQAVDHAALAGTCADGSVLIPLSAWEIENITRVKSALRSAMRNKLRQGETLGLLDMAV IEAAEPAEFIRVAKRAALTAQPDWSRAPMAGKTRAKDTSQLASVRRSKIFNPEEHDVLFAKADFLIDRSHS
Sequences:
>Translated_391_residues MNTSVFFDIAAALAVTALLAESYGAVRRRMVGTNLAPVVLGVLFGLMALLQMFNPVEPYDGLIIDMRNVPIALAGAFLGW RGVLPCLAIAFATRYGIGGVGMLAGVVGMTIAGLAGIIWARLTAHLEQRGLGLLLLLAAAMSTHVVSGVVVPRDMAIWFF SVAAAPIVLVNFLAVPLIGSLLERENRRIQRENKLSAAITRDPETGLLTGPALVRDLTNAYAAQPFGTFAGFLKVTPDRR FWSLYGGLFGAAHPRPVDASDLTQAVDHAALAGTCADGSVLIPLSAWEIENITRVKSALRSAMRNKLRQGETLGLLDMAV IEAAEPAEFIRVAKRAALTAQPDWSRAPMAGKTRAKDTSQLASVRRSKIFNPEEHDVLFAKADFLIDRSHS >Mature_391_residues MNTSVFFDIAAALAVTALLAESYGAVRRRMVGTNLAPVVLGVLFGLMALLQMFNPVEPYDGLIIDMRNVPIALAGAFLGW RGVLPCLAIAFATRYGIGGVGMLAGVVGMTIAGLAGIIWARLTAHLEQRGLGLLLLLAAAMSTHVVSGVVVPRDMAIWFF SVAAAPIVLVNFLAVPLIGSLLERENRRIQRENKLSAAITRDPETGLLTGPALVRDLTNAYAAQPFGTFAGFLKVTPDRR FWSLYGGLFGAAHPRPVDASDLTQAVDHAALAGTCADGSVLIPLSAWEIENITRVKSALRSAMRNKLRQGETLGLLDMAV IEAAEPAEFIRVAKRAALTAQPDWSRAPMAGKTRAKDTSQLASVRRSKIFNPEEHDVLFAKADFLIDRSHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41880; Mature: 41880
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSVFFDIAAALAVTALLAESYGAVRRRMVGTNLAPVVLGVLFGLMALLQMFNPVEPYD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC GLIIDMRNVPIALAGAFLGWRGVLPCLAIAFATRYGIGGVGMLAGVVGMTIAGLAGIIWA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RLTAHLEQRGLGLLLLLAAAMSTHVVSGVVVPRDMAIWFFSVAAAPIVLVNFLAVPLIGS HHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLERENRRIQRENKLSAAITRDPETGLLTGPALVRDLTNAYAAQPFGTFAGFLKVTPDRR HHHHHHHHHHHHHHHHHHEECCCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHEECCCHH FWSLYGGLFGAAHPRPVDASDLTQAVDHAALAGTCADGSVLIPLSAWEIENITRVKSALR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH SAMRNKLRQGETLGLLDMAVIEAAEPAEFIRVAKRAALTAQPDWSRAPMAGKTRAKDTSQ HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH LASVRRSKIFNPEEHDVLFAKADFLIDRSHS HHHHHHHHCCCCCCCCEEEEEHHHHEECCCC >Mature Secondary Structure MNTSVFFDIAAALAVTALLAESYGAVRRRMVGTNLAPVVLGVLFGLMALLQMFNPVEPYD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCC GLIIDMRNVPIALAGAFLGWRGVLPCLAIAFATRYGIGGVGMLAGVVGMTIAGLAGIIWA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RLTAHLEQRGLGLLLLLAAAMSTHVVSGVVVPRDMAIWFFSVAAAPIVLVNFLAVPLIGS HHHHHHHHCCCHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLERENRRIQRENKLSAAITRDPETGLLTGPALVRDLTNAYAAQPFGTFAGFLKVTPDRR HHHHHHHHHHHHHHHHHHEECCCCCCCEECHHHHHHHHHHHHCCCHHHHHHHHEECCCHH FWSLYGGLFGAAHPRPVDASDLTQAVDHAALAGTCADGSVLIPLSAWEIENITRVKSALR HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHH SAMRNKLRQGETLGLLDMAVIEAAEPAEFIRVAKRAALTAQPDWSRAPMAGKTRAKDTSQ HHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH LASVRRSKIFNPEEHDVLFAKADFLIDRSHS HHHHHHHHCCCCCCCCEEEEEHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA