| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052937
Identifier: 89052937
GI number: 89052937
Start: 449588
End: 450325
Strand: Reverse
Name: 89052937
Synonym: Jann_0446
Alternate gene names: NA
Gene position: 450325-449588 (Counterclockwise)
Preceding gene: 89052940
Following gene: 89052936
Centisome position: 10.43
GC content: 63.82
Gene sequence:
>738_bases ATGACAGACGCAGTTGAAATTTTGGGCGCGGAGCGATCCGGGCGGTGGGTCGTGACCTGTGATCACGCCTGCAACCGCGT GCCGGACGACGTGGCTGGCGGAGACCTTGGCCTGCCGCCTGCGGATATGGCACGCCACATCGCTTACGACGTGGGCGCCC TGGGTGTTGCGCGGGCGATGGGAGAGGCGCTGAATGGCCCGGTTGTGACCTCCCGTTTTTCGCGCCTCGTGATCGACCCC AACCGGGGTGAGGATGACCCGACACTTCTGATGCAAATCTACGACGGCTCCATCATTCCCGCCAATCGCGGGGCCTCGCA GGCAGAGATTGACCGCCGGCTTGACCGCTTTCATCGCCCCTACCACAGGGCCTTGGCGCACGTGATCGCACAGCGAGACG ACCCGATTGTCGTCGCTATCCACAGCTTCACCCCGCAATTGATCGGACGCGCGCCGAGACCCTGGCATGTGTCGGTCCTG TATGCCGGGGACACCCGGTTGCCGTATCCACTGCTGGCGCGTCTGCGGGATGAAGATGATCTTTGCGTCGGCGATAACGA GCCCTATTCCGGCCATCTGCCAGGCGACGCGCTGGACCGGCACGGCGTGCAGCCCGGGCGCCTCCATGTGTTGATCGAAG TACGCAACGATCTGATTGAAACGGCCGAAGATCAGGCCCGTTGGGGCGTCAGGCTGGCCCAGATGCTTGAAGCTGCCGCA ACGAGCGCCGATCTATAG
Upstream 100 bases:
>100_bases CTATTGGCGCAAAACGCGCGCCCGAACAACCGGGCAGAGCGCTGGTCATTGGCCGTAGACCGAATTACCGCTGTATTCAG ATGATTTGGATGACATTTGC
Downstream 100 bases:
>100_bases GTCAAACCCAAGGAGATCCCCATGAGCGAGCCCACCAAGACCGAGCTTGAAGCCGCCACCTTCCGCCGCCTGCTGGCGCA TCTGGACAGCCGCAAGGACG
Product: N-formylglutamate amidohydrolase
Products: NA
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTDAVEILGAERSGRWVVTCDHACNRVPDDVAGGDLGLPPADMARHIAYDVGALGVARAMGEALNGPVVTSRFSRLVIDP NRGEDDPTLLMQIYDGSIIPANRGASQAEIDRRLDRFHRPYHRALAHVIAQRDDPIVVAIHSFTPQLIGRAPRPWHVSVL YAGDTRLPYPLLARLRDEDDLCVGDNEPYSGHLPGDALDRHGVQPGRLHVLIEVRNDLIETAEDQARWGVRLAQMLEAAA TSADL
Sequences:
>Translated_245_residues MTDAVEILGAERSGRWVVTCDHACNRVPDDVAGGDLGLPPADMARHIAYDVGALGVARAMGEALNGPVVTSRFSRLVIDP NRGEDDPTLLMQIYDGSIIPANRGASQAEIDRRLDRFHRPYHRALAHVIAQRDDPIVVAIHSFTPQLIGRAPRPWHVSVL YAGDTRLPYPLLARLRDEDDLCVGDNEPYSGHLPGDALDRHGVQPGRLHVLIEVRNDLIETAEDQARWGVRLAQMLEAAA TSADL >Mature_244_residues TDAVEILGAERSGRWVVTCDHACNRVPDDVAGGDLGLPPADMARHIAYDVGALGVARAMGEALNGPVVTSRFSRLVIDPN RGEDDPTLLMQIYDGSIIPANRGASQAEIDRRLDRFHRPYHRALAHVIAQRDDPIVVAIHSFTPQLIGRAPRPWHVSVLY AGDTRLPYPLLARLRDEDDLCVGDNEPYSGHLPGDALDRHGVQPGRLHVLIEVRNDLIETAEDQARWGVRLAQMLEAAAT SADL
Specific function: Unknown
COG id: COG3931
COG function: function code E; Predicted N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26847; Mature: 26715
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAVEILGAERSGRWVVTCDHACNRVPDDVAGGDLGLPPADMARHIAYDVGALGVARAM CCCHHHHHCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GEALNGPVVTSRFSRLVIDPNRGEDDPTLLMQIYDGSIIPANRGASQAEIDRRLDRFHRP HHHHCCCCHHHHCCEEEECCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCH YHRALAHVIAQRDDPIVVAIHSFTPQLIGRAPRPWHVSVLYAGDTRLPYPLLARLRDEDD HHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCC LCVGDNEPYSGHLPGDALDRHGVQPGRLHVLIEVRNDLIETAEDQARWGVRLAQMLEAAA EEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TSADL HCCCC >Mature Secondary Structure TDAVEILGAERSGRWVVTCDHACNRVPDDVAGGDLGLPPADMARHIAYDVGALGVARAM CCHHHHHCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GEALNGPVVTSRFSRLVIDPNRGEDDPTLLMQIYDGSIIPANRGASQAEIDRRLDRFHRP HHHHCCCCHHHHCCEEEECCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHCCH YHRALAHVIAQRDDPIVVAIHSFTPQLIGRAPRPWHVSVLYAGDTRLPYPLLARLRDEDD HHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCC LCVGDNEPYSGHLPGDALDRHGVQPGRLHVLIEVRNDLIETAEDQARWGVRLAQMLEAAA EEECCCCCCCCCCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH TSADL HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA