| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052936
Identifier: 89052936
GI number: 89052936
Start: 449270
End: 449566
Strand: Reverse
Name: 89052936
Synonym: Jann_0445
Alternate gene names: NA
Gene position: 449566-449270 (Counterclockwise)
Preceding gene: 89052937
Following gene: 89052930
Centisome position: 10.41
GC content: 61.28
Gene sequence:
>297_bases ATGAGCGAGCCCACCAAGACCGAGCTTGAAGCCGCCACCTTCCGCCGCCTGCTGGCGCATCTGGACAGCCGCAAGGACGT GCAGAACATCGACATGATGAATCTGACGGGCTTTTGCCGGAACTGCCTGAGCCGCTGGTATCAGGAGGAAGCCGCCGACC GGGGCGTCACGATAGATAAGGACGCCGCGCGGGAAATCATCTACGGTATGCCGTATCCAGAATGGCGCGATAAGTACCAG ACCGAGGCCAGCGCCGAGCAGCAGGCCGCCTTTGAGGGCAACAAGTCAGCGCACTAA
Upstream 100 bases:
>100_bases AACGGCCGAAGATCAGGCCCGTTGGGGCGTCAGGCTGGCCCAGATGCTTGAAGCTGCCGCAACGAGCGCCGATCTATAGG TCAAACCCAAGGAGATCCCC
Downstream 100 bases:
>100_bases CGCCCGGCTAAAATTTACCGCCCCAAGGCCAGGAGCCGAGGATCAGGCGGCTTTTTGAGCCGCTTCCGAGCGCAGGAACG CTGGCTTTCCGGGCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSEPTKTELEAATFRRLLAHLDSRKDVQNIDMMNLTGFCRNCLSRWYQEEAADRGVTIDKDAAREIIYGMPYPEWRDKYQ TEASAEQQAAFEGNKSAH
Sequences:
>Translated_98_residues MSEPTKTELEAATFRRLLAHLDSRKDVQNIDMMNLTGFCRNCLSRWYQEEAADRGVTIDKDAAREIIYGMPYPEWRDKYQ TEASAEQQAAFEGNKSAH >Mature_97_residues SEPTKTELEAATFRRLLAHLDSRKDVQNIDMMNLTGFCRNCLSRWYQEEAADRGVTIDKDAAREIIYGMPYPEWRDKYQT EASAEQQAAFEGNKSAH
Specific function: Unknown
COG id: COG3492
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11319; Mature: 11187
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTKTELEAATFRRLLAHLDSRKDVQNIDMMNLTGFCRNCLSRWYQEEAADRGVTIDK CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DAAREIIYGMPYPEWRDKYQTEASAEQQAAFEGNKSAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SEPTKTELEAATFRRLLAHLDSRKDVQNIDMMNLTGFCRNCLSRWYQEEAADRGVTIDK CCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DAAREIIYGMPYPEWRDKYQTEASAEQQAAFEGNKSAH HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA