| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052914
Identifier: 89052914
GI number: 89052914
Start: 426324
End: 426968
Strand: Direct
Name: 89052914
Synonym: Jann_0423
Alternate gene names: NA
Gene position: 426324-426968 (Clockwise)
Preceding gene: 89052913
Following gene: 89052915
Centisome position: 9.87
GC content: 59.53
Gene sequence:
>645_bases ATGATGACACACGCTGACCTCCCGGGGACGATCCCGATCTTTCCCCTGCCGGGTGCGCTGATGCTGCCCCGCGCGCGGTT GCCGCTCCATATTTTTGAGCCGCGCTACCTTCAGATGATTGAAGATACGCTGAAGACCTCTCATCGGCTGATTGGGATGG TGCAGCCCTTTGAAGCGCCCGGCTCGGGTGAGCAAAAGTTGCACCACATCGGTTGCGCCGGGCGGCTCACGCAGTTCTCC GAAACGGAGGACGGGCGCTACATGATCACGCTGGCGGGCATGTCGCGGTTTCGGATCAGCAAAGAGGTTCAGGGTTTCGC GCCCTATCGCCGCTGCGATGTGTCGTGGGACGGCTTCAGCGCTGATCTGGGTCCGACGGAGGTCGACAAGCTCTTTGACC GCGACAGTTTTCTTGATCTGTTGAACAGGTATTTTGAGGCGCAGGACCTGTCCACCGATTGGGACAGCTTGAAAGACGCG GAGGATGAGCTGCTGATCAACTCGCTCTCGATGCTGTGCCCCTTCGATCCCGAGGAAAAGCAGGCGTTGCTGGAAGCGCC GTCGCTGAGTACGCGGCGAGAGACTTTGGTGACTTTGCTGGAATTCGCGCTGGCCTCCGGAACCGATGAAGAGCGGATGC AATGA
Upstream 100 bases:
>100_bases CGACGCGCTCCCGCCGCAAGATCCGATCGCGTTAACTGGCCGTCGGAGACTCAGCTCGATGATATTTGCCTGAGACAAGG ATCAGCCTACGTCCCTATCC
Downstream 100 bases:
>100_bases GCGACGGGGACACGAACGGTCCTACAGGGCCGATTGACCGTCGCATGCTGGAGGCGCTCGTTTGCCCCATGACCCAGGCG CCGCTGAGCTACGATGCCGA
Product: peptidase S16, lon-like
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease; ATP-Dependent Protease La Domain Subfamily; Peptidase S; ATP-Dependent Protease La Domain; ATP-Dependent La Family Protease; Lon Protease Domain-Containing Protein; ATP-Dependent Proteinase; ATP-Dependent Protease LA 2 Protein; Lon-Like ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein LonD; Lon-Like Peptidase; ATP-Dependent Protease Lon; ATP-Dependent Protease La LON; ATP-Dependent Protease Family Protein; Lon Family ATP-Dependent Protease; S16 Family Peptidase; ATP-Dependent Endopeptidase Lon
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MMTHADLPGTIPIFPLPGALMLPRARLPLHIFEPRYLQMIEDTLKTSHRLIGMVQPFEAPGSGEQKLHHIGCAGRLTQFS ETEDGRYMITLAGMSRFRISKEVQGFAPYRRCDVSWDGFSADLGPTEVDKLFDRDSFLDLLNRYFEAQDLSTDWDSLKDA EDELLINSLSMLCPFDPEEKQALLEAPSLSTRRETLVTLLEFALASGTDEERMQ
Sequences:
>Translated_214_residues MMTHADLPGTIPIFPLPGALMLPRARLPLHIFEPRYLQMIEDTLKTSHRLIGMVQPFEAPGSGEQKLHHIGCAGRLTQFS ETEDGRYMITLAGMSRFRISKEVQGFAPYRRCDVSWDGFSADLGPTEVDKLFDRDSFLDLLNRYFEAQDLSTDWDSLKDA EDELLINSLSMLCPFDPEEKQALLEAPSLSTRRETLVTLLEFALASGTDEERMQ >Mature_214_residues MMTHADLPGTIPIFPLPGALMLPRARLPLHIFEPRYLQMIEDTLKTSHRLIGMVQPFEAPGSGEQKLHHIGCAGRLTQFS ETEDGRYMITLAGMSRFRISKEVQGFAPYRRCDVSWDGFSADLGPTEVDKLFDRDSFLDLLNRYFEAQDLSTDWDSLKDA EDELLINSLSMLCPFDPEEKQALLEAPSLSTRRETLVTLLEFALASGTDEERMQ
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24257; Mature: 24257
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTHADLPGTIPIFPLPGALMLPRARLPLHIFEPRYLQMIEDTLKTSHRLIGMVQPFEAP CCCCCCCCCCCEEEECCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC GSGEQKLHHIGCAGRLTQFSETEDGRYMITLAGMSRFRISKEVQGFAPYRRCDVSWDGFS CCCHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCC ADLGPTEVDKLFDRDSFLDLLNRYFEAQDLSTDWDSLKDAEDELLINSLSMLCPFDPEEK CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHH QALLEAPSLSTRRETLVTLLEFALASGTDEERMQ HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC >Mature Secondary Structure MMTHADLPGTIPIFPLPGALMLPRARLPLHIFEPRYLQMIEDTLKTSHRLIGMVQPFEAP CCCCCCCCCCCEEEECCCHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCC GSGEQKLHHIGCAGRLTQFSETEDGRYMITLAGMSRFRISKEVQGFAPYRRCDVSWDGFS CCCHHHHHHHCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCCCCCCC ADLGPTEVDKLFDRDSFLDLLNRYFEAQDLSTDWDSLKDAEDELLINSLSMLCPFDPEEK CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHH QALLEAPSLSTRRETLVTLLEFALASGTDEERMQ HHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA