Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052910

Identifier: 89052910

GI number: 89052910

Start: 422110

End: 423360

Strand: Reverse

Name: 89052910

Synonym: Jann_0419

Alternate gene names: NA

Gene position: 423360-422110 (Counterclockwise)

Preceding gene: 89052916

Following gene: 89052907

Centisome position: 9.8

GC content: 67.31

Gene sequence:

>1251_bases
ATGCCAGCACTCATCCGCGAGAATCGCAACTTCCGCCTGCTGATGTCCGGGGCGGGCGTGTCGAACCTGTCTGACGGGAT
CGGCGCGCTGGCCTTTCCGTGGATGGCGACCCTGATCACCACTGACCCGCGCGCTTTAGCGATTGTCGCCTTCGCCACGC
GCCTGCCGTGGTTCCTGTGGTCCCTGCCCGTGGGCGTCTGGACGGACCGCGCGGATCGGCAGAAGATGATGGTGCGCGCG
GATCTGGCGCGCATGGCGCTGGCCATGGCGGTTGTCGCGCTGATCGTTGCGGGCCCGAGGGACGGGGGGCAGGTCGCTTG
GATGATCGGCGGATTGGCGGCGCTGGCCTTCCTTATGGGCACCGCAGAAGTCTTCCGCGACAACGCAGCCCAAACCGCCC
TTCCCAGCGTTGTGCCCAAGGACCGGCTGGAAGAAGCCAACGGCCAGATCTGGTCGGTAGAACAGGTCATGGGTCAGTTC
ATCGGGCCGCCGCTGGCAGGCTTCCTGATCGCGGTCGCCGCCCCCGCGCCGTTCCTGTTTGAAGCGTTGGGCTTCGCGCT
GGCGGCCTTCGCCGTCTGGGCCATTGCCTTCCCCGCGCGCGGCGCATTGGTCCCGCGCCGGGGCTTCTGGACCGAGATGA
ATGCGGGCTGGACGTGGATCCGCGAGCATAAGGTGATCCTGCAACTGGCGCTGATACTGGGCGGGTTGAACGCCGCCCAT
ATGGCCGGGTTCACCATTCTCGTCCTGTTCAGCCAGGAGGTTCTTGGCCTGGGCGCGGTGGGCCACGGAATGCTGCTGAC
GGCAGGGGCCGCTGGCGGCGTCGCGGGCGGGTTGCTATGCCCCTGGGTCGCCAAGCGCCTCGGCGCATCGCGCAGCCTGT
GGGTGGCGCTGGCGTTGATGCCGCTGCCGTTTCTGGGCCTGTATTTCACGTCTCAGGTCTGGGTCGCGGTGGTCCTGCTG
TTTCTGGAAACCTTCGTGGCGGTCCTGTGGAACGTCGTCACCGTATCGTTCCGCCAGCGCGTCATCCCCGACGCGCTTCT
GGGCCGGGTGAACTCCATCTACCGCTTCTTCGGCTGGGGCATGATGCCCCTTGGTGCGCTGGCGGGCGGCTGGATCATGG
CGCTGGCGGAGCCGTCCATGGGCCGCGAAGATGCGCTGCGGCTGGTGTTCCTGCTCTGCGCGGGGCTGTTCGCCGCGCTT
TTCCTCTATGGATTGGCGCGATTGCGGTTGCCGAAGGGGGCGGCGGGGTAA

Upstream 100 bases:

>100_bases
CGAGGAGCACAAGCGCGAGAAGGAGTTTGAACAAAAACCGCATGGGGGACATTGTGCTTCTCACACGCGCCAGCGCAAGG
TGCTTGCAAAGGAGAGGCCG

Downstream 100 bases:

>100_bases
ACCCTGCCCTAAGGGGCAAAGCGGCTTGCCTTAGGTGCGGTCCGTCAACAGACGCAGGCCCGCATAGGCAAAGAATGTGC
CCAAGACGCCCTGGATCCCA

Product: major facilitator transporter

Products: NA

Alternate protein names: Antibiotic Efflux Protein; Facilitator Superfamily Protein; Antibiotic Transporter; Facilitator Superfamily Transporter; Facilitator MFS1 Protein; Integral Membrane Efflux Protein; MFS Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease; MFS Superfamily Transporter

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPALIRENRNFRLLMSGAGVSNLSDGIGALAFPWMATLITTDPRALAIVAFATRLPWFLWSLPVGVWTDRADRQKMMVRA
DLARMALAMAVVALIVAGPRDGGQVAWMIGGLAALAFLMGTAEVFRDNAAQTALPSVVPKDRLEEANGQIWSVEQVMGQF
IGPPLAGFLIAVAAPAPFLFEALGFALAAFAVWAIAFPARGALVPRRGFWTEMNAGWTWIREHKVILQLALILGGLNAAH
MAGFTILVLFSQEVLGLGAVGHGMLLTAGAAGGVAGGLLCPWVAKRLGASRSLWVALALMPLPFLGLYFTSQVWVAVVLL
FLETFVAVLWNVVTVSFRQRVIPDALLGRVNSIYRFFGWGMMPLGALAGGWIMALAEPSMGREDALRLVFLLCAGLFAAL
FLYGLARLRLPKGAAG

Sequences:

>Translated_416_residues
MPALIRENRNFRLLMSGAGVSNLSDGIGALAFPWMATLITTDPRALAIVAFATRLPWFLWSLPVGVWTDRADRQKMMVRA
DLARMALAMAVVALIVAGPRDGGQVAWMIGGLAALAFLMGTAEVFRDNAAQTALPSVVPKDRLEEANGQIWSVEQVMGQF
IGPPLAGFLIAVAAPAPFLFEALGFALAAFAVWAIAFPARGALVPRRGFWTEMNAGWTWIREHKVILQLALILGGLNAAH
MAGFTILVLFSQEVLGLGAVGHGMLLTAGAAGGVAGGLLCPWVAKRLGASRSLWVALALMPLPFLGLYFTSQVWVAVVLL
FLETFVAVLWNVVTVSFRQRVIPDALLGRVNSIYRFFGWGMMPLGALAGGWIMALAEPSMGREDALRLVFLLCAGLFAAL
FLYGLARLRLPKGAAG
>Mature_415_residues
PALIRENRNFRLLMSGAGVSNLSDGIGALAFPWMATLITTDPRALAIVAFATRLPWFLWSLPVGVWTDRADRQKMMVRAD
LARMALAMAVVALIVAGPRDGGQVAWMIGGLAALAFLMGTAEVFRDNAAQTALPSVVPKDRLEEANGQIWSVEQVMGQFI
GPPLAGFLIAVAAPAPFLFEALGFALAAFAVWAIAFPARGALVPRRGFWTEMNAGWTWIREHKVILQLALILGGLNAAHM
AGFTILVLFSQEVLGLGAVGHGMLLTAGAAGGVAGGLLCPWVAKRLGASRSLWVALALMPLPFLGLYFTSQVWVAVVLLF
LETFVAVLWNVVTVSFRQRVIPDALLGRVNSIYRFFGWGMMPLGALAGGWIMALAEPSMGREDALRLVFLLCAGLFAALF
LYGLARLRLPKGAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44556; Mature: 44424

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALIRENRNFRLLMSGAGVSNLSDGIGALAFPWMATLITTDPRALAIVAFATRLPWFLW
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLPVGVWTDRADRQKMMVRADLARMALAMAVVALIVAGPRDGGQVAWMIGGLAALAFLMG
HCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
TAEVFRDNAAQTALPSVVPKDRLEEANGQIWSVEQVMGQFIGPPLAGFLIAVAAPAPFLF
HHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHH
EALGFALAAFAVWAIAFPARGALVPRRGFWTEMNAGWTWIREHKVILQLALILGGLNAAH
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
MAGFTILVLFSQEVLGLGAVGHGMLLTAGAAGGVAGGLLCPWVAKRLGASRSLWVALALM
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
PLPFLGLYFTSQVWVAVVLLFLETFVAVLWNVVTVSFRQRVIPDALLGRVNSIYRFFGWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
MMPLGALAGGWIMALAEPSMGREDALRLVFLLCAGLFAALFLYGLARLRLPKGAAG
HHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PALIRENRNFRLLMSGAGVSNLSDGIGALAFPWMATLITTDPRALAIVAFATRLPWFLW
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLPVGVWTDRADRQKMMVRADLARMALAMAVVALIVAGPRDGGQVAWMIGGLAALAFLMG
HCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
TAEVFRDNAAQTALPSVVPKDRLEEANGQIWSVEQVMGQFIGPPLAGFLIAVAAPAPFLF
HHHHHHCCCHHHHCCCCCCHHHHHHHCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCHHHH
EALGFALAAFAVWAIAFPARGALVPRRGFWTEMNAGWTWIREHKVILQLALILGGLNAAH
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
MAGFTILVLFSQEVLGLGAVGHGMLLTAGAAGGVAGGLLCPWVAKRLGASRSLWVALALM
HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
PLPFLGLYFTSQVWVAVVLLFLETFVAVLWNVVTVSFRQRVIPDALLGRVNSIYRFFGWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCC
MMPLGALAGGWIMALAEPSMGREDALRLVFLLCAGLFAALFLYGLARLRLPKGAAG
HHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA