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The map label for this gene is ctpA [H]

Identifier: 89052872

GI number: 89052872

Start: 387045

End: 388370

Strand: Direct

Name: ctpA [H]

Synonym: Jann_0381

Alternate gene names: 89052872

Gene position: 387045-388370 (Clockwise)

Preceding gene: 89052871

Following gene: 89052873

Centisome position: 8.96

GC content: 62.14

Gene sequence:

>1326_bases
ATGAAGAAACTGATGATGGCAGCCGTGGGCGGGATTGCAGGCGGAGTGCTGTTGAGCACTCAGGTCGCGGGTCCCTTGCT
GGCACAGGAGGCGGAGCGGAATTCTTCTGTCTATGAACAGCTGGATCTGTTCGGCGATATCTTCGAGCGTATTCGCCAGA
ATTACGTGGAAGACGTCGATGAGGCAGAGCTGATCGAGGCGGCAATCAACGGCATGCTGATCTCTCTCGATCCGCATTCG
TCCTATATCTCGGCCAGTGACTTTGAAGACATGCAGGTGCAAACGCGCGGCGAGTTTGGCGGTCTTGGCATCGAAGTGAC
CCAGGAAGACGGCTTCGTGCGCGTGATCACGCCGATGGATGACACGCCTGCGATGGAGGCCGGTGTCGAGGCCGGTGATT
TCATCACAGCCGTCGACGGGGAGGCGCTGCTGGGTCTGACCCTGGAGCAATCCGTTGACCTGATGCGCGGCCCCGTGGGC
AGTGACATCATCATCACCATCGTGCGCGAAGGGGCGGACGAGCCGTTTGACCTGACGATCACCCGCGACCGCATTCAACT
GACCGCCGTGCGCGCGCGGCTGGAAGGCAATACCGCGATCCTGCGCGTCTCCACCTTCAGCGACCAGACCTTCCCCAATC
TGCGCGAAGGGTTGCTGGAGCTGATCGAAGAGGTCGGCGGGTTGGACAACATGAACGGTGTCGTGCTGGACCTGCGCAAC
AACCCCGGCGGTCTGCTGAACCAGGCGATCCGTGTGTCCGATGCGTTTCTGGAGCAGGGCGAGATCGTCTCGACCCGTGG
TCGGGAGCCCCAGGACGGGGAGCGCTATAACGCCACCCCCGGCGATATGATCGAAGGCCTGCCGATGGTGGTGCTGATCA
ACGGTGGCTCTGCCTCCGCGTCCGAGATTGTGGCCGGTGCGTTGCAGGATCACCGCCGTGCGGTGGTCGTGGGCACCAAC
AGCTTTGGCAAGGGCTCCGTCCAGTCGGTGATGCCGCTGGCCGGTGATGGCGCGATGCGGTTGACGACGTCGCTGTATTA
TACGCCGTCGGGCCGATCCATTCAGGCGCTTGGCGTGGCCCCCGATATCATCGTGGAGCAGCGCGATCCGATCGAGGTGG
AGGAGGACGAAGACGGTCGCCCCGCCCGCACGGAGGCCGGTCTGCGCGGCGCGATTGAAAACTCCAGCCTGACGGAAGAC
CAGTTGCAGCAATTGGAGGAAGAGCGTGCCATTGCCGAGGCGACCGCAGCCCTGCGCAACGAAGATTATCAGCTGGCCTA
TGCTATTGATATCCTGACGGGTCTTGGCGCGTTAGGTCCGAACTGA

Upstream 100 bases:

>100_bases
GCTTTATATGGAACTCAGACAGGGTGGGAACCCGGTGGATCCGATGGAATGGTTTGCCGCGCAATAGACCGCCGAGATGA
AAATTAGAGGACGACGTGCA

Downstream 100 bases:

>100_bases
GTGGCTGATCTACCTTATCGCCCGTGCGCGGGGGTCGTTTTGACCAACGCGGACGGGCGTATCTTTGCGGGACAGCGCGC
AGGGTTCGACACGCCCGCCT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MKKLMMAAVGGIAGGVLLSTQVAGPLLAQEAERNSSVYEQLDLFGDIFERIRQNYVEDVDEAELIEAAINGMLISLDPHS
SYISASDFEDMQVQTRGEFGGLGIEVTQEDGFVRVITPMDDTPAMEAGVEAGDFITAVDGEALLGLTLEQSVDLMRGPVG
SDIIITIVREGADEPFDLTITRDRIQLTAVRARLEGNTAILRVSTFSDQTFPNLREGLLELIEEVGGLDNMNGVVLDLRN
NPGGLLNQAIRVSDAFLEQGEIVSTRGREPQDGERYNATPGDMIEGLPMVVLINGGSASASEIVAGALQDHRRAVVVGTN
SFGKGSVQSVMPLAGDGAMRLTTSLYYTPSGRSIQALGVAPDIIVEQRDPIEVEEDEDGRPARTEAGLRGAIENSSLTED
QLQQLEEERAIAEATAALRNEDYQLAYAIDILTGLGALGPN

Sequences:

>Translated_441_residues
MKKLMMAAVGGIAGGVLLSTQVAGPLLAQEAERNSSVYEQLDLFGDIFERIRQNYVEDVDEAELIEAAINGMLISLDPHS
SYISASDFEDMQVQTRGEFGGLGIEVTQEDGFVRVITPMDDTPAMEAGVEAGDFITAVDGEALLGLTLEQSVDLMRGPVG
SDIIITIVREGADEPFDLTITRDRIQLTAVRARLEGNTAILRVSTFSDQTFPNLREGLLELIEEVGGLDNMNGVVLDLRN
NPGGLLNQAIRVSDAFLEQGEIVSTRGREPQDGERYNATPGDMIEGLPMVVLINGGSASASEIVAGALQDHRRAVVVGTN
SFGKGSVQSVMPLAGDGAMRLTTSLYYTPSGRSIQALGVAPDIIVEQRDPIEVEEDEDGRPARTEAGLRGAIENSSLTED
QLQQLEEERAIAEATAALRNEDYQLAYAIDILTGLGALGPN
>Mature_441_residues
MKKLMMAAVGGIAGGVLLSTQVAGPLLAQEAERNSSVYEQLDLFGDIFERIRQNYVEDVDEAELIEAAINGMLISLDPHS
SYISASDFEDMQVQTRGEFGGLGIEVTQEDGFVRVITPMDDTPAMEAGVEAGDFITAVDGEALLGLTLEQSVDLMRGPVG
SDIIITIVREGADEPFDLTITRDRIQLTAVRARLEGNTAILRVSTFSDQTFPNLREGLLELIEEVGGLDNMNGVVLDLRN
NPGGLLNQAIRVSDAFLEQGEIVSTRGREPQDGERYNATPGDMIEGLPMVVLINGGSASASEIVAGALQDHRRAVVVGTN
SFGKGSVQSVMPLAGDGAMRLTTSLYYTPSGRSIQALGVAPDIIVEQRDPIEVEEDEDGRPARTEAGLRGAIENSSLTED
QLQQLEEERAIAEATAALRNEDYQLAYAIDILTGLGALGPN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=360, Percent_Identity=30.5555555555556, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47209; Mature: 47209

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMMAAVGGIAGGVLLSTQVAGPLLAQEAERNSSVYEQLDLFGDIFERIRQNYVEDVD
CCHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EAELIEAAINGMLISLDPHSSYISASDFEDMQVQTRGEFGGLGIEVTQEDGFVRVITPMD
HHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCC
DTPAMEAGVEAGDFITAVDGEALLGLTLEQSVDLMRGPVGSDIIITIVREGADEPFDLTI
CCCHHHCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEE
TRDRIQLTAVRARLEGNTAILRVSTFSDQTFPNLREGLLELIEEVGGLDNMNGVVLDLRN
ECCCEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NPGGLLNQAIRVSDAFLEQGEIVSTRGREPQDGERYNATPGDMIEGLPMVVLINGGSASA
CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCH
SEIVAGALQDHRRAVVVGTNSFGKGSVQSVMPLAGDGAMRLTTSLYYTPSGRSIQALGVA
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCC
PDIIVEQRDPIEVEEDEDGRPARTEAGLRGAIENSSLTEDQLQQLEEERAIAEATAALRN
CCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EDYQLAYAIDILTGLGALGPN
CCCEEEEHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKLMMAAVGGIAGGVLLSTQVAGPLLAQEAERNSSVYEQLDLFGDIFERIRQNYVEDVD
CCHHHHHHHHHHHCCHHEEHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
EAELIEAAINGMLISLDPHSSYISASDFEDMQVQTRGEFGGLGIEVTQEDGFVRVITPMD
HHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCC
DTPAMEAGVEAGDFITAVDGEALLGLTLEQSVDLMRGPVGSDIIITIVREGADEPFDLTI
CCCHHHCCCCCCCEEEEECCCEEEEEEHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEE
TRDRIQLTAVRARLEGNTAILRVSTFSDQTFPNLREGLLELIEEVGGLDNMNGVVLDLRN
ECCCEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
NPGGLLNQAIRVSDAFLEQGEIVSTRGREPQDGERYNATPGDMIEGLPMVVLINGGSASA
CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCH
SEIVAGALQDHRRAVVVGTNSFGKGSVQSVMPLAGDGAMRLTTSLYYTPSGRSIQALGVA
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCEEEEECCC
PDIIVEQRDPIEVEEDEDGRPARTEAGLRGAIENSSLTEDQLQQLEEERAIAEATAALRN
CCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EDYQLAYAIDILTGLGALGPN
CCCEEEEHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]