| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is gpmI [H]
Identifier: 89052870
GI number: 89052870
Start: 384340
End: 385854
Strand: Direct
Name: gpmI [H]
Synonym: Jann_0379
Alternate gene names: 89052870
Gene position: 384340-385854 (Clockwise)
Preceding gene: 89052869
Following gene: 89052871
Centisome position: 8.9
GC content: 64.36
Gene sequence:
>1515_bases ATGACAGACCACCCGCGCCCCGTTGTTTTGTGCATTCTGGACGGCTGGGGCATTGGTCAGACGCAAGCAGACAACGCGCC GCTTCTGGCGGACACGCCTGTGATGGATGACCTGATGGCGCGGTGTCCCCATGCGACGCTGCTGACGCATGGGCGTGATG TGGGCCTGCCGGAGGGGCAGATGGGCAATTCCGAGGTCGGCCACACCAATATCGGCGCGGGGCGTGTGGTGAAAATGGAT CTGGTGGAGATCAACGACGCGATTGAGGCGGGGGAATTTGCCGGGCGGGCGGCTTTGGTGGCGTTTGTTGAGACGTTGAA GAAAAGCGGCGGAACGGCGCATCTGATGGGGCTGGTGAGCGACGGCGGCGTGCATTCGCAGCTGGCGCATCTGGAGGCGG CGGTGGCGGTTCTGGTGGAGGCGGGCGTGCCGGTGGCCGTTCACGCGATCACCGATGGGCGCGATGTTGCCCCGAAATCG GCAGACGGGTTTTTGCGGGGTCTGACACTGCCGGAGGGGGCGAAGATCGCGACGGTCTGCGGGCGCTATTTCGCGCTGGA CCGCGACACTCGCTGGGACCGGGTGGAAAGGGCTTACAGCGCGATGGTGCGTGGAGAGGGCGACGGGGCCAACGACGCCT TGGGCGCTGTGGCGCAGGCCTATGACGCGGACAAGACCGATGAGTTCATTCCGCCGACGGTCGTGGGTGACTACGCCGGG ATGCGCGATGGGGATGGTATTTTCATGCTGAACTACCGGGCGGACCGCGCGCGAGAAATTTTGTCAGCGCTAGGTGATCA GGCGTTTGACGGCTTCGATGTGACCGGTCGGCCCAAGTTCGCGGCCAGGCTGGGGATGGTCGATTATTCCAAAGCCCATG ACGCCTATATGACGACGGTGTTCCCGAAGCAGGAGATCGTAAACACGCTGGGCGAATGGGTCTCCAAAGCGGGGCTGCGG CAGTTCCGCGTGGCGGAGACGGAAAAGTACCCCCATGTGACGTTTTTCCTGAATGGCGGCGTCGAGGTGCCGGAGCCGGG GGAAGACCGGGAGATGCCGAAATCACCCAATGTCGCGACCTATGATTTGCAGCCCGAGATGAGCGCGCGCGAGGTGACGG ACCTTCTGGTGCGCGCGATCCGGGAGCCTTACGACCTGATTGTGGTGAACTTCGCCAATCCTGACATGGTGGGTCATACC GGCGATTTGCAGGCTGCGATTGCGGCGTGTGAGGCGGTGGATGCGGGGCTTGGTCAGGCGGTGGCGGCGCTGGAAGAGAT GGGTGGCGCGATGATCGTCTGCGCCGATCACGGGAATTGCGAGATGATGGTGGACCCGGAGACGGGCGGGCCGCACACGG CCCATACGACGAACCTTGTGCCGGTGGTGATGGTGGGCGGACCAGCGGGCGCGGGCCTGCGGGACGGGCGGCTGGCGGAT CTGGCGCCATCGCTTTTGGCCTTGATGGGGCTGGAGCAACCGGCGGAGATGACGGGGGAGAGTTTGATCCGGTGA
Upstream 100 bases:
>100_bases CCGGGCGGTGACGTCCGGCACGGTCGTCGTTTCGGTGAGAAGGACGATTGCAGCGCGGAGGCGGCCTCCATAGAACGGTT TGGTAAAGGAGTTCTCACCC
Downstream 100 bases:
>100_bases CGTCGCTTCGCTTGCATATGATCAGGCCGCTCCTCGGGCTCGCGCTGATTGCAGCGCTCCCCCTCCTCGCCGCGGTGCCG GGCACAGCGCAGAGCGATCC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTDHPRPVVLCILDGWGIGQTQADNAPLLADTPVMDDLMARCPHATLLTHGRDVGLPEGQMGNSEVGHTNIGAGRVVKMD LVEINDAIEAGEFAGRAALVAFVETLKKSGGTAHLMGLVSDGGVHSQLAHLEAAVAVLVEAGVPVAVHAITDGRDVAPKS ADGFLRGLTLPEGAKIATVCGRYFALDRDTRWDRVERAYSAMVRGEGDGANDALGAVAQAYDADKTDEFIPPTVVGDYAG MRDGDGIFMLNYRADRAREILSALGDQAFDGFDVTGRPKFAARLGMVDYSKAHDAYMTTVFPKQEIVNTLGEWVSKAGLR QFRVAETEKYPHVTFFLNGGVEVPEPGEDREMPKSPNVATYDLQPEMSAREVTDLLVRAIREPYDLIVVNFANPDMVGHT GDLQAAIAACEAVDAGLGQAVAALEEMGGAMIVCADHGNCEMMVDPETGGPHTAHTTNLVPVVMVGGPAGAGLRDGRLAD LAPSLLALMGLEQPAEMTGESLIR
Sequences:
>Translated_504_residues MTDHPRPVVLCILDGWGIGQTQADNAPLLADTPVMDDLMARCPHATLLTHGRDVGLPEGQMGNSEVGHTNIGAGRVVKMD LVEINDAIEAGEFAGRAALVAFVETLKKSGGTAHLMGLVSDGGVHSQLAHLEAAVAVLVEAGVPVAVHAITDGRDVAPKS ADGFLRGLTLPEGAKIATVCGRYFALDRDTRWDRVERAYSAMVRGEGDGANDALGAVAQAYDADKTDEFIPPTVVGDYAG MRDGDGIFMLNYRADRAREILSALGDQAFDGFDVTGRPKFAARLGMVDYSKAHDAYMTTVFPKQEIVNTLGEWVSKAGLR QFRVAETEKYPHVTFFLNGGVEVPEPGEDREMPKSPNVATYDLQPEMSAREVTDLLVRAIREPYDLIVVNFANPDMVGHT GDLQAAIAACEAVDAGLGQAVAALEEMGGAMIVCADHGNCEMMVDPETGGPHTAHTTNLVPVVMVGGPAGAGLRDGRLAD LAPSLLALMGLEQPAEMTGESLIR >Mature_503_residues TDHPRPVVLCILDGWGIGQTQADNAPLLADTPVMDDLMARCPHATLLTHGRDVGLPEGQMGNSEVGHTNIGAGRVVKMDL VEINDAIEAGEFAGRAALVAFVETLKKSGGTAHLMGLVSDGGVHSQLAHLEAAVAVLVEAGVPVAVHAITDGRDVAPKSA DGFLRGLTLPEGAKIATVCGRYFALDRDTRWDRVERAYSAMVRGEGDGANDALGAVAQAYDADKTDEFIPPTVVGDYAGM RDGDGIFMLNYRADRAREILSALGDQAFDGFDVTGRPKFAARLGMVDYSKAHDAYMTTVFPKQEIVNTLGEWVSKAGLRQ FRVAETEKYPHVTFFLNGGVEVPEPGEDREMPKSPNVATYDLQPEMSAREVTDLLVRAIREPYDLIVVNFANPDMVGHTG DLQAAIAACEAVDAGLGQAVAALEEMGGAMIVCADHGNCEMMVDPETGGPHTAHTTNLVPVVMVGGPAGAGLRDGRLADL APSLLALMGLEQPAEMTGESLIR
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=509, Percent_Identity=45.5795677799607, Blast_Score=436, Evalue=1e-123, Organism=Caenorhabditis elegans, GI32564249, Length=512, Percent_Identity=45.5078125, Blast_Score=400, Evalue=1e-112, Organism=Caenorhabditis elegans, GI17507741, Length=512, Percent_Identity=45.5078125, Blast_Score=400, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 53365; Mature: 53234
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHPRPVVLCILDGWGIGQTQADNAPLLADTPVMDDLMARCPHATLLTHGRDVGLPEGQ CCCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEECCCCCCCCCCCC MGNSEVGHTNIGAGRVVKMDLVEINDAIEAGEFAGRAALVAFVETLKKSGGTAHLMGLVS CCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEC DGGVHSQLAHLEAAVAVLVEAGVPVAVHAITDGRDVAPKSADGFLRGLTLPEGAKIATVC CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHH GRYFALDRDTRWDRVERAYSAMVRGEGDGANDALGAVAQAYDADKTDEFIPPTVVGDYAG HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC MRDGDGIFMLNYRADRAREILSALGDQAFDGFDVTGRPKFAARLGMVDYSKAHDAYMTTV CCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEE FPKQEIVNTLGEWVSKAGLRQFRVAETEKYPHVTFFLNGGVEVPEPGEDREMPKSPNVAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE YDLQPEMSAREVTDLLVRAIREPYDLIVVNFANPDMVGHTGDLQAAIAACEAVDAGLGQA EECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH VAALEEMGGAMIVCADHGNCEMMVDPETGGPHTAHTTNLVPVVMVGGPAGAGLRDGRLAD HHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH LAPSLLALMGLEQPAEMTGESLIR HHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure TDHPRPVVLCILDGWGIGQTQADNAPLLADTPVMDDLMARCPHATLLTHGRDVGLPEGQ CCCCCEEEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEECCCCCCCCCCCC MGNSEVGHTNIGAGRVVKMDLVEINDAIEAGEFAGRAALVAFVETLKKSGGTAHLMGLVS CCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEEC DGGVHSQLAHLEAAVAVLVEAGVPVAVHAITDGRDVAPKSADGFLRGLTLPEGAKIATVC CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCHHHHHH GRYFALDRDTRWDRVERAYSAMVRGEGDGANDALGAVAQAYDADKTDEFIPPTVVGDYAG HHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC MRDGDGIFMLNYRADRAREILSALGDQAFDGFDVTGRPKFAARLGMVDYSKAHDAYMTTV CCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEE FPKQEIVNTLGEWVSKAGLRQFRVAETEKYPHVTFFLNGGVEVPEPGEDREMPKSPNVAT CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEE YDLQPEMSAREVTDLLVRAIREPYDLIVVNFANPDMVGHTGDLQAAIAACEAVDAGLGQA EECCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHH VAALEEMGGAMIVCADHGNCEMMVDPETGGPHTAHTTNLVPVVMVGGPAGAGLRDGRLAD HHHHHHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHH LAPSLLALMGLEQPAEMTGESLIR HHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA