Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052867

Identifier: 89052867

GI number: 89052867

Start: 381890

End: 382522

Strand: Reverse

Name: 89052867

Synonym: Jann_0376

Alternate gene names: NA

Gene position: 382522-381890 (Counterclockwise)

Preceding gene: 89052876

Following gene: 89052866

Centisome position: 8.86

GC content: 60.03

Gene sequence:

>633_bases
ATGCCAAGGGCGGGGATCATGTGTTTCATCTCATCACCTTTCCTGAATCCAATAATTATTGTTTTACAGAAAGTTTTTTC
TCTTTTACAAGGGGTCATGGATAACCTTTTGCAAACCCGCCGCATCGCGCGCCCGTTGTCGTATCTGACGACCGCCGCGC
TTTTCGCCTATCCCGTCACGCTGGCTGTCCTGGCGCTGTCGGGGTATTTTGACGCCGCCTACTTGCGCGACGCCTATGCC
TCTACGACCCTGCCTGACGTTATTCCAAAGGGCACCTGGGTCGCCGTCTATGCCATCGCCCTGGTGTCCGTGGCGCTTGT
CTGCGTCCTGCTCTGGAACATCCGCGCGCTGCTTGTCCTGTTCGCCATCGGGGATGTTTTGGGGGCAGAGGTCGCGCATC
GAATCCGCCGCATCGGAGGGCTGTTGCTGGCGCTCGCGATCTATGGCGTGGTGTCCAACACCCTCACTATCCTGGCCCTG
ACCGCCGCCAATCCGCCGGGCGCACGCAGCCTGGCAATCGGGGTCAGCAACACCGATCTGTTCCTGTTTCTCGCCGCCGG
GTTGATGACTGTCATCGGCCTTGCCATGTCCGAGGCCGCGCGCATCGCCGCCGAGAACCGGGGCTTCATCTGA

Upstream 100 bases:

>100_bases
TTGCACAGCCATCCCGGTGGGGTCTGCGGTCAACGGGTCCAACGCTGCCAGGCGCAAAAGCGTCACCGGGTTCACGCTGA
GACAGCCCGTCAGGGCCAGA

Downstream 100 bases:

>100_bases
TGCAGACGTTGGAGGTCATCGTCCGGCTCGACGTCATGATGGCGCGACGCAAGATGAAGGGCCGGGACCTTGCGGCGCAG
ATCGGTATCACGGAAGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MPRAGIMCFISSPFLNPIIIVLQKVFSLLQGVMDNLLQTRRIARPLSYLTTAALFAYPVTLAVLALSGYFDAAYLRDAYA
STTLPDVIPKGTWVAVYAIALVSVALVCVLLWNIRALLVLFAIGDVLGAEVAHRIRRIGGLLLALAIYGVVSNTLTILAL
TAANPPGARSLAIGVSNTDLFLFLAAGLMTVIGLAMSEAARIAAENRGFI

Sequences:

>Translated_210_residues
MPRAGIMCFISSPFLNPIIIVLQKVFSLLQGVMDNLLQTRRIARPLSYLTTAALFAYPVTLAVLALSGYFDAAYLRDAYA
STTLPDVIPKGTWVAVYAIALVSVALVCVLLWNIRALLVLFAIGDVLGAEVAHRIRRIGGLLLALAIYGVVSNTLTILAL
TAANPPGARSLAIGVSNTDLFLFLAAGLMTVIGLAMSEAARIAAENRGFI
>Mature_209_residues
PRAGIMCFISSPFLNPIIIVLQKVFSLLQGVMDNLLQTRRIARPLSYLTTAALFAYPVTLAVLALSGYFDAAYLRDAYAS
TTLPDVIPKGTWVAVYAIALVSVALVCVLLWNIRALLVLFAIGDVLGAEVAHRIRRIGGLLLALAIYGVVSNTLTILALT
AANPPGARSLAIGVSNTDLFLFLAAGLMTVIGLAMSEAARIAAENRGFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22319; Mature: 22188

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRAGIMCFISSPFLNPIIIVLQKVFSLLQGVMDNLLQTRRIARPLSYLTTAALFAYPVT
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLALSGYFDAAYLRDAYASTTLPDVIPKGTWVAVYAIALVSVALVCVLLWNIRALLVL
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIGDVLGAEVAHRIRRIGGLLLALAIYGVVSNTLTILALTAANPPGARSLAIGVSNTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHH
FLFLAAGLMTVIGLAMSEAARIAAENRGFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRAGIMCFISSPFLNPIIIVLQKVFSLLQGVMDNLLQTRRIARPLSYLTTAALFAYPVT
CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVLALSGYFDAAYLRDAYASTTLPDVIPKGTWVAVYAIALVSVALVCVLLWNIRALLVL
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAIGDVLGAEVAHRIRRIGGLLLALAIYGVVSNTLTILALTAANPPGARSLAIGVSNTDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCHH
FLFLAAGLMTVIGLAMSEAARIAAENRGFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA