| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is yxiO [H]
Identifier: 89052834
GI number: 89052834
Start: 347571
End: 348935
Strand: Direct
Name: yxiO [H]
Synonym: Jann_0343
Alternate gene names: 89052834
Gene position: 347571-348935 (Clockwise)
Preceding gene: 89052833
Following gene: 89052835
Centisome position: 8.05
GC content: 61.39
Gene sequence:
>1365_bases ATGGACACCGTGCTTCCTTCCACAGCCACAGGCACCCGAAAACGCATCTGGGGCTGGTGGGCCTTTGACTGGGCGAGCCA GCCCTACAACACCCTTCTTCTGACCTTCATCTTCGGACCTTATGTGAACGAGCTTCTGGGCGACGGCACGCAGGCACAAA CCGCCTGGGGCTACGGCGTCGGCACGGCGGGCTTCCTGATCGCGATATCGGCCCCGTTTCTGGGCGCGATGGCAGATCTG TCGGGGCGGCGGATACCGTTCATCTGGCTGTTCTCGGTCATGTATTTCGTCGGATCTTATGGCTTGTGGTGGGCCGCGCC GGGGGATTTCAACCTGATGCTCACCTTGATCCTGTTCGCCATCGGGCTGATCGGGATGGAGTTCGCGACGATCTTCACCA ACGCCATGCTGCCGACACTTGGGGGGCGGAACGAGATCGGGCGGATCTCAGGCTCCGGGTTTGCCTGGGGCTATGTTGGC GGGCTGATCGCGCTGGTCCTGATGCTGTTTTTCTTCGCCGAGAATGCGGAAACCGGGAAAACCCTTCTGGGGCTCGATCC AATCCTTGGCCTTGACGCAGAAACGCGGGAGGGAACGCGCGCCGTCGGGCCGCTGACCGCGATCTGGTTTGGCATTGGCA TGATCCCGTTCTTCTTGTGGGTGCGCGACACGCCATTGCCCGGTGCGGTGCCCATGGGTCAGGCCCTGCGCGGTGCCATG CCCGCCTTGATGAAAACCCTGCGCCGACTGCCGTCGGAGAAGCCGTTGATGGCCTATCTGCTGTCGTCGATGTTTTACCG TGACGCGCTCAACGGCATGTACGTCTTTGGCGGTATCTATGCCTCGGGCGTTCTGGGGTGGAGCGTTGTGGATGTGGGCA TTTTCGGCATCCTCGCGATCCTGACCGGTGCGTTTTTCTCCTGGCTTGGGGGGCGCGCTGACGGGCGCTTCGGGCCGAAA CCCGTGATCGTGTTGAATGTCATTCTGCTGAGCTTCGTGGCGCTGGCCGTCGTGTTTGTCAGCCGTGACAGCGTGTTGGG CATCCCGGTCGCCGAGGGCTCGTCCTTGCCCGACATTGCCTTCTATATCCTTGGCGCGTTCATCGGCGCGTGCGGGGGTG CGCTTCAATCGTCATCGCGCACGATGCTGGTGCGCCAGGCCTATCCTGACCGCATGACGGAGGCGTTCGGCCTCTATGCG CTGGCGGGCAAGGCCACATCCTTCATTGCACCGCTGTCCATCGGTGTGGTCACACAGATTTCAGGCAGCCAACAGGTGGG GGTTGTCCCGCTGGTTGTTTTGTTCACTATTGGCTTGATTTTGCTGTTTTGGGTCGACCCGCAGGGTCGCAAGACGAATG ACTGA
Upstream 100 bases:
>100_bases ACGCTGGGCTGAGGCCGACGGGACACGGCCCTGGCCACCGGAATTCTAGGGCGACGCTTAGCCGTGGACAAACCGGGCGC TGCAAAGGAAGGTTAATGTC
Downstream 100 bases:
>100_bases TCCCGCAGGGTCGCAAGACGAATGACTGATCCCGCAGGGTCGCAAGACGAATGACTGATCCCGCAGGGTCGCAATGCAAA TGATTGATCCCGCAGGGTCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND
Sequences:
>Translated_454_residues MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND >Mature_454_residues MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGVGTAGFLIAISAPFLGAMADL SGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFAIGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVG GLIALVLMLFFFAENAETGKTLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAILTGAFFSWLGGRADGRFGPK PVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIAFYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYA LAGKATSFIAPLSIGVVTQISGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND
Specific function: Unknown
COG id: COG2270
COG function: function code R; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48726; Mature: 48726
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGV CCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTAGFLIAISAPFLGAMADLSGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFA CHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH IGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVGGLIALVLMLFFFAENAETGK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH LTGAFFSWLGGRADGRFGPKPVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH FYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYALAGKATSFIAPLSIGVVTQI HHHHHHHHHHHCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEE SGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC >Mature Secondary Structure MDTVLPSTATGTRKRIWGWWAFDWASQPYNTLLLTFIFGPYVNELLGDGTQAQTAWGYGV CCCCCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GTAGFLIAISAPFLGAMADLSGRRIPFIWLFSVMYFVGSYGLWWAAPGDFNLMLTLILFA CHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH IGLIGMEFATIFTNAMLPTLGGRNEIGRISGSGFAWGYVGGLIALVLMLFFFAENAETGK HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC TLLGLDPILGLDAETREGTRAVGPLTAIWFGIGMIPFFLWVRDTPLPGAVPMGQALRGAM EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH PALMKTLRRLPSEKPLMAYLLSSMFYRDALNGMYVFGGIYASGVLGWSVVDVGIFGILAI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH LTGAFFSWLGGRADGRFGPKPVIVLNVILLSFVALAVVFVSRDSVLGIPVAEGSSLPDIA HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH FYILGAFIGACGGALQSSSRTMLVRQAYPDRMTEAFGLYALAGKATSFIAPLSIGVVTQI HHHHHHHHHHHCHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEE SGSQQVGVVPLVVLFTIGLILLFWVDPQGRKTND CCCCCCCHHHHHHHHHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]