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The map label for this gene is petC [H]

Identifier: 89052818

GI number: 89052818

Start: 332569

End: 333378

Strand: Direct

Name: petC [H]

Synonym: Jann_0327

Alternate gene names: 89052818

Gene position: 332569-333378 (Clockwise)

Preceding gene: 89052817

Following gene: 89052822

Centisome position: 7.7

GC content: 60.62

Gene sequence:

>810_bases
ATGCTCAGGAAACTAGCAATCAGCGCCACGGCGGCGCTGGCCCTCTCCACCGGGGGCGCGATGGCAGCCGGCGGCGCGGG
CGAAATCACCAACGTTCCATTCTCGTTCCAGGGACCGTTTGGCACCTTTGATCAGGACCAGCTTCAGCGTGGCCTTCAGG
TCTACACTGAGGTCTGTGCCGGGTGTCACGGTCTGCAATACGTGCCCCTGCGCGCGCTGGCAGATGAGGGCGGTATCGGT
TGGACCGATGATGAGGTTCGCGCCTACATCGATGAGAACTTCATCGAGGTCTATGACCCGGATCTGGAAGACTGGCGCAC
GGCCGTGCCGAATGACAACTTTCCGGCCAATGATGGCGTCGGTGCACCTGATCTCAGCCTGATGGCGAAGGCCCGTACCG
GGTTTTCCGGACCCCGTGGCACAGCAATCTATCCGCTGCTCTACGGTCTGGGTGGTCCGGAGTATATCTACTCGCTCCTG
ACCCACTACACAGGCGAAGAGGTGGAGCAGTTTGGCACCATTCTTTACGTGAACGAAACGATGGAAGGTGGGTTGATCTC
CATGGCCCCGCCCCTGTGGGAAGGCGCTGTGGAATATGCCGATGGCACTGTTGCCACTGAATCGCAGATGGCTGAAGACG
TGGCCGCGTTTCTGATGTGGACGGCAGAGCCGCACATGATGGCGCGCAAGCAAATGGGCTTGGTCGCGGTCATCATCCTC
GGCATCTTCTCGGTCCTGCTGTACCTGACCAACAAGCGCCTTTGGGCACCGGTCAAGGCCCGCGCCAAGGGCACACAGCC
CGCCGAATAA

Upstream 100 bases:

>100_bases
TCGAGGAAGACTTCAACAACCACGTGTCCGGCGACAGCGGCACACCCGGTTCCGGTACGGCCCCCGTGGCCTCCCCGGCA
GAATGAGAGAGGAGCTGACA

Downstream 100 bases:

>100_bases
GTTTTGGCTTATCACTGATGATGAAAGCGCGCCCTTCAGGGCGCGTTTTTTGTATTGGGCGTGCGTTGTCTGGCCCGGGC
TACATCCAGGGACGCAGCGG

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MLRKLAISATAALALSTGGAMAAGGAGEITNVPFSFQGPFGTFDQDQLQRGLQVYTEVCAGCHGLQYVPLRALADEGGIG
WTDDEVRAYIDENFIEVYDPDLEDWRTAVPNDNFPANDGVGAPDLSLMAKARTGFSGPRGTAIYPLLYGLGGPEYIYSLL
THYTGEEVEQFGTILYVNETMEGGLISMAPPLWEGAVEYADGTVATESQMAEDVAAFLMWTAEPHMMARKQMGLVAVIIL
GIFSVLLYLTNKRLWAPVKARAKGTQPAE

Sequences:

>Translated_269_residues
MLRKLAISATAALALSTGGAMAAGGAGEITNVPFSFQGPFGTFDQDQLQRGLQVYTEVCAGCHGLQYVPLRALADEGGIG
WTDDEVRAYIDENFIEVYDPDLEDWRTAVPNDNFPANDGVGAPDLSLMAKARTGFSGPRGTAIYPLLYGLGGPEYIYSLL
THYTGEEVEQFGTILYVNETMEGGLISMAPPLWEGAVEYADGTVATESQMAEDVAAFLMWTAEPHMMARKQMGLVAVIIL
GIFSVLLYLTNKRLWAPVKARAKGTQPAE
>Mature_269_residues
MLRKLAISATAALALSTGGAMAAGGAGEITNVPFSFQGPFGTFDQDQLQRGLQVYTEVCAGCHGLQYVPLRALADEGGIG
WTDDEVRAYIDENFIEVYDPDLEDWRTAVPNDNFPANDGVGAPDLSLMAKARTGFSGPRGTAIYPLLYGLGGPEYIYSLL
THYTGEEVEQFGTILYVNETMEGGLISMAPPLWEGAVEYADGTVATESQMAEDVAAFLMWTAEPHMMARKQMGLVAVIIL
GIFSVLLYLTNKRLWAPVKARAKGTQPAE

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21359867, Length=258, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI17506225, Length=259, Percent_Identity=31.2741312741313, Blast_Score=103, Evalue=8e-23,
Organism=Saccharomyces cerevisiae, GI6324639, Length=246, Percent_Identity=39.8373983739837, Blast_Score=135, Evalue=6e-33,
Organism=Drosophila melanogaster, GI24658292, Length=268, Percent_Identity=33.955223880597, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI21358225, Length=246, Percent_Identity=30.0813008130081, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 29000; Mature: 29000

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLAISATAALALSTGGAMAAGGAGEITNVPFSFQGPFGTFDQDQLQRGLQVYTEVCA
CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
GCHGLQYVPLRALADEGGIGWTDDEVRAYIDENFIEVYDPDLEDWRTAVPNDNFPANDGV
CCCCCEECHHHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCCCC
GAPDLSLMAKARTGFSGPRGTAIYPLLYGLGGPEYIYSLLTHYTGEEVEQFGTILYVNET
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECC
MEGGLISMAPPLWEGAVEYADGTVATESQMAEDVAAFLMWTAEPHMMARKQMGLVAVIIL
CCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GIFSVLLYLTNKRLWAPVKARAKGTQPAE
HHHHHHHHHHCCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure
MLRKLAISATAALALSTGGAMAAGGAGEITNVPFSFQGPFGTFDQDQLQRGLQVYTEVCA
CCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH
GCHGLQYVPLRALADEGGIGWTDDEVRAYIDENFIEVYDPDLEDWRTAVPNDNFPANDGV
CCCCCEECHHHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCHHHHHHCCCCCCCCCCCCC
GAPDLSLMAKARTGFSGPRGTAIYPLLYGLGGPEYIYSLLTHYTGEEVEQFGTILYVNET
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECC
MEGGLISMAPPLWEGAVEYADGTVATESQMAEDVAAFLMWTAEPHMMARKQMGLVAVIIL
CCCCEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
GIFSVLLYLTNKRLWAPVKARAKGTQPAE
HHHHHHHHHHCCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2820981 [H]