Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052759

Identifier: 89052759

GI number: 89052759

Start: 276582

End: 277088

Strand: Direct

Name: 89052759

Synonym: Jann_0268

Alternate gene names: NA

Gene position: 276582-277088 (Clockwise)

Preceding gene: 89052758

Following gene: 89052760

Centisome position: 6.41

GC content: 61.34

Gene sequence:

>507_bases
ATGGGGCTTAAATCACGTCTTCTGGCGCTGTGCCTGTGTTTGGCAGCCCCTGCCGTTGCACAGGCGCAAGACGCACTTTG
GCCTGTCTATGTGCAAGACAATCCGACCCGCTGTTGGATTGTCTCGACGCCCACTGACACGGTGGCCTCTCGTGATGGGC
AAGACGTGTCAGATAACATCAGCCGGGACGAAGTGCTTTTGTTCGTGTCGTTCTGGCCCGAGGATGGCCGAGTCGGAGAG
ATCAGTTATACTGGCGGATATCAGTTTGCGGTCGGCAGTACGGTGTCGCTTGTTGTAGGGAGCCTTGCGGTTGAGATGTT
CACCGAAGGGCCGATGTCCTGGGCAGGGTCCCCCGAAGACGACGCGCGTATCATCGCCGCGATGCGCGACGGATCGGAGG
TCGTGGTGACCGCGACCTCCACGCGCGGGACGGAGGTTGCCGACACCTTCAACCCGCAAGGCTTCGCGCTGGCCATGGAT
GACGCCCAGGTCCGTTGCGCGCCCTGA

Upstream 100 bases:

>100_bases
CGCGCTCCTCTCGCGGAACCCAAACGCAGGACACGTTCAGCCTTCTGGGCTTTACGGCAGCGGTTGAGGATGCAGAGGCC
CGCTGCGGGAACTGATCGTC

Downstream 100 bases:

>100_bases
GGGGTTTGCGTGGACGCGTGGCCTCCTATATGGGAAGCCAATCCTAGGAAGAGTATTGTTGTCATGACCGCCACTGCGCC
TATCACGCAAGACGTTCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGE
ISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMD
DAQVRCAP

Sequences:

>Translated_168_residues
MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGE
ISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMD
DAQVRCAP
>Mature_167_residues
GLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNISRDEVLLFVSFWPEDGRVGEI
SYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPEDDARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDD
AQVRCAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17898; Mature: 17767

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNI
CCHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCEEEEEECCCHHHHCCCCCCCCCCC
SRDEVLLFVSFWPEDGRVGEISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPED
CCCEEEEEEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
DARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDDAQVRCAP
CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECC
>Mature Secondary Structure 
GLKSRLLALCLCLAAPAVAQAQDALWPVYVQDNPTRCWIVSTPTDTVASRDGQDVSDNI
CHHHHHHHHHHHHHCCCHHHHCCCEEEEEEECCCCEEEEEECCCHHHHCCCCCCCCCCC
SRDEVLLFVSFWPEDGRVGEISYTGGYQFAVGSTVSLVVGSLAVEMFTEGPMSWAGSPED
CCCEEEEEEEECCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
DARIIAAMRDGSEVVVTATSTRGTEVADTFNPQGFALAMDDAQVRCAP
CCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA