| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052746
Identifier: 89052746
GI number: 89052746
Start: 255269
End: 256321
Strand: Reverse
Name: 89052746
Synonym: Jann_0255
Alternate gene names: NA
Gene position: 256321-255269 (Counterclockwise)
Preceding gene: 89052747
Following gene: 89052745
Centisome position: 5.94
GC content: 63.91
Gene sequence:
>1053_bases ATGATCCGCCTCCTTTTCGCGTCGCTCCTCGCAGCCTCCCCGATCCACGCCCAGGGTTTTGCGGGTCTGGGCACGGTCGC CGACGGGTTCGCGGTGCCCGCACCGAACCCGACATTCTCGTTCCCCGACGATCACGGCCCGCACCCCGATTACCGGATCG AGTGGTGGTATCTGACAGCCACCCTGACCGGCGCGGATGGGATCGACTATGGCATCCAATGGACTCTCTTCCGCAGCGCG CTTGCGCCCACCACGTCCACGGATTGGACCGCGCCGCAGATCTTCATGGGCCATGCGGGCCTCACCACGCCCGATGCGCA CTTCAGTGCGGAGCGTTTGGCGCGTGGCGGCATCGGGCAGGCCGGCGTCACGCCCGTACCGTTCCGCGCCTTCATTGATG ATTGGGAAATGACCTCCACCACAGCGGAAGGCGATGCCTACGATGCCCTCTCCCTCACCGCGCGGGGGGTGGATTTCGCC TATGACCTCGCCCTGCAAGCCAACGGGCCGCTGATCTTCCATGGGCAAAACGGCTTCTCGGTCAAAAGCGCGGAGGGGCA GGCCAGTTACTATTACTCGCAGCCTTTCTACACGGTCACCGGCACCCTCACGCTTCCCACTGGCGCGGTTGAGGTGTCCG GCAACGCCTGGCTCGACCGGGAATGGTCATCGCAACCCTTGTCAGACGATCAGAGCGGATGGGACTGGTTCTCCCTCCAA CTCCCCGACGGTGCGCGGCTGATGGCGTTCGCCCTGCGCGACACCAGTGACCAGCCCTTCACGTCCGCCACCTACATCGC GCCCGATGGCACAACGCAAGCCTACGGTGACGGTGCGATCACCTTGACGCCTTTGGTGACAACGGATGTGGGCGGGCGGG ATGTCCCTACGGAATGGCGGCTCCAGTTTCCGGACCGGGGCATCGACATTACGACGCAACCGCTCAATCCGCAAAGTTGG ATGGACACCTCCTTTCCCTATTGGGAAGGCCCGATCACATTCACCGGCACCCACGATGGGCGCGGATATCTGGAGATGAC CGGCTATGAGTGA
Upstream 100 bases:
>100_bases TCGCCCTTCTCGCCGCTGGCCTCGCAGCCCTCGGCCCAACCCTGCGTCTGGCCCGCATTCCGCCCGCCCGCCTCACGCAG GTTTTCGCACAGGAGAGATA
Downstream 100 bases:
>100_bases TACGGTACTAACCGGCCTATTAGACACTGTTTGGCAGCAATTCGGGCGCGGAACCAAGGACCGCCATCATCCCGCGCGTC ACCCTACATTGGCCACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MIRLLFASLLAASPIHAQGFAGLGTVADGFAVPAPNPTFSFPDDHGPHPDYRIEWWYLTATLTGADGIDYGIQWTLFRSA LAPTTSTDWTAPQIFMGHAGLTTPDAHFSAERLARGGIGQAGVTPVPFRAFIDDWEMTSTTAEGDAYDALSLTARGVDFA YDLALQANGPLIFHGQNGFSVKSAEGQASYYYSQPFYTVTGTLTLPTGAVEVSGNAWLDREWSSQPLSDDQSGWDWFSLQ LPDGARLMAFALRDTSDQPFTSATYIAPDGTTQAYGDGAITLTPLVTTDVGGRDVPTEWRLQFPDRGIDITTQPLNPQSW MDTSFPYWEGPITFTGTHDGRGYLEMTGYE
Sequences:
>Translated_350_residues MIRLLFASLLAASPIHAQGFAGLGTVADGFAVPAPNPTFSFPDDHGPHPDYRIEWWYLTATLTGADGIDYGIQWTLFRSA LAPTTSTDWTAPQIFMGHAGLTTPDAHFSAERLARGGIGQAGVTPVPFRAFIDDWEMTSTTAEGDAYDALSLTARGVDFA YDLALQANGPLIFHGQNGFSVKSAEGQASYYYSQPFYTVTGTLTLPTGAVEVSGNAWLDREWSSQPLSDDQSGWDWFSLQ LPDGARLMAFALRDTSDQPFTSATYIAPDGTTQAYGDGAITLTPLVTTDVGGRDVPTEWRLQFPDRGIDITTQPLNPQSW MDTSFPYWEGPITFTGTHDGRGYLEMTGYE >Mature_350_residues MIRLLFASLLAASPIHAQGFAGLGTVADGFAVPAPNPTFSFPDDHGPHPDYRIEWWYLTATLTGADGIDYGIQWTLFRSA LAPTTSTDWTAPQIFMGHAGLTTPDAHFSAERLARGGIGQAGVTPVPFRAFIDDWEMTSTTAEGDAYDALSLTARGVDFA YDLALQANGPLIFHGQNGFSVKSAEGQASYYYSQPFYTVTGTLTLPTGAVEVSGNAWLDREWSSQPLSDDQSGWDWFSLQ LPDGARLMAFALRDTSDQPFTSATYIAPDGTTQAYGDGAITLTPLVTTDVGGRDVPTEWRLQFPDRGIDITTQPLNPQSW MDTSFPYWEGPITFTGTHDGRGYLEMTGYE
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38044; Mature: 38044
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLLFASLLAASPIHAQGFAGLGTVADGFAVPAPNPTFSFPDDHGPHPDYRIEWWYLTA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEE TLTGADGIDYGIQWTLFRSALAPTTSTDWTAPQIFMGHAGLTTPDAHFSAERLARGGIGQ EEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCC AGVTPVPFRAFIDDWEMTSTTAEGDAYDALSLTARGVDFAYDLALQANGPLIFHGQNGFS CCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCE VKSAEGQASYYYSQPFYTVTGTLTLPTGAVEVSGNAWLDREWSSQPLSDDQSGWDWFSLQ EECCCCCEEEEECCCEEEEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCCEEEEE LPDGARLMAFALRDTSDQPFTSATYIAPDGTTQAYGDGAITLTPLVTTDVGGRDVPTEWR CCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEEECCCCCCCCCCEE LQFPDRGIDITTQPLNPQSWMDTSFPYWEGPITFTGTHDGRGYLEMTGYE EECCCCCCEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCC >Mature Secondary Structure MIRLLFASLLAASPIHAQGFAGLGTVADGFAVPAPNPTFSFPDDHGPHPDYRIEWWYLTA CHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEEEE TLTGADGIDYGIQWTLFRSALAPTTSTDWTAPQIFMGHAGLTTPDAHFSAERLARGGIGQ EEECCCCCCCCEEEEEEHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCCC AGVTPVPFRAFIDDWEMTSTTAEGDAYDALSLTARGVDFAYDLALQANGPLIFHGQNGFS CCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCEEEECCCCCE VKSAEGQASYYYSQPFYTVTGTLTLPTGAVEVSGNAWLDREWSSQPLSDDQSGWDWFSLQ EECCCCCEEEEECCCEEEEEEEEEECCCEEEECCCEEECCCCCCCCCCCCCCCCCEEEEE LPDGARLMAFALRDTSDQPFTSATYIAPDGTTQAYGDGAITLTPLVTTDVGGRDVPTEWR CCCCCEEEEEEEECCCCCCCCEEEEECCCCCCEECCCCCEEEEEEEEECCCCCCCCCCEE LQFPDRGIDITTQPLNPQSWMDTSFPYWEGPITFTGTHDGRGYLEMTGYE EECCCCCCEEEECCCCCHHCCCCCCCCCCCCEEEEECCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA