| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is serB [C]
Identifier: 89052743
GI number: 89052743
Start: 252225
End: 253100
Strand: Reverse
Name: serB [C]
Synonym: Jann_0252
Alternate gene names: 89052743
Gene position: 253100-252225 (Counterclockwise)
Preceding gene: 89052745
Following gene: 89052738
Centisome position: 5.86
GC content: 60.62
Gene sequence:
>876_bases ATGTTCACCGTCACCCTCATGACCAACCACGCCATGTATCTGGACGGCAGCCTTGTGACCAACCTGGTCAAAGCCATGAA CGCCGAGGCCCCCCGCTGGCTTGATCCCAACCATTGCGCCGAGTTCGACACACCGAAGATCCCGAAGAATATCCAGACGG TCTGGGAAAGCCTCAGCGCCGAAGGGGTGGATCTTGTCTGGCAAAAGGCGGGCGACCGGAAGAAGCGGATGCTTCTGGCC GATATGGACAGCACGATGATCCAGCAGGAATGTATTGATGAGCTCGCCGATGAAGCGGGTGTCGGCAAGCGCGTGGCCGA CATCACCGCGCGCGCCATGAATGGGGAGTTGGAGTTTGAAGACGCACTGCTGGAACGTGTCGGTCTTCTGAAGGGTCTGT CCGAGGCGACCATTGCGACGGTTCTGGAAAAGCGCATCACGCTGATGCCCGGGGGGGATGTCCTGCTTGCCACGATGAAG GCAAATGGCGCCCATTGCGCTCTGGTCTCCGGCGGCTTTACCGCGTTTACCAGCGCCATCGCCGCGAAACTCGGCTTTGA CGAACATCACGCCAATACTCTGCTTGCGGAGAACGGAGCACTCACCGGCGATGTCGCCCGTCCGATCCTGGGGCGCGACG CCAAGGTCGACGCGCTGACCCGCATCACCAAAACCCTCGGTATCAAGCCCAAAGACGTCCTCGCCGTGGGGGACGGGGCC AACGATCTCGGCATGCTCCACCTTGCCGGAACCGGCGTCGCGCTACACGCGAAACCTGCGGTTCAGGAACAAGCAAAGCA CCGCGTGAATCACGCCAACCTCACGGCGCTACTGTTCATTCAAGGGTATGCTAAGGCGGATTTCGTCACGCCGTGA
Upstream 100 bases:
>100_bases TCCACTGTTTCATGACCCGCCACATAGCCCGCGCCAATCCACTGGTCCAGCACGCCTCCGCCGCCTATGTTGCCCAAAAC ACGACCGGAGGTTCGAGCCC
Downstream 100 bases:
>100_bases CCCGCCCTCCGCCGTGTATCCCACCCTCAAGCTGACCTGTTTGTGACGGACCTGTCCGCAAACGGCCTTTCAGCGGGCAT TCACCCTGAAACCCAGTGCC
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFTVTLMTNHAMYLDGSLVTNLVKAMNAEAPRWLDPNHCAEFDTPKIPKNIQTVWESLSAEGVDLVWQKAGDRKKRMLLA DMDSTMIQQECIDELADEAGVGKRVADITARAMNGELEFEDALLERVGLLKGLSEATIATVLEKRITLMPGGDVLLATMK ANGAHCALVSGGFTAFTSAIAAKLGFDEHHANTLLAENGALTGDVARPILGRDAKVDALTRITKTLGIKPKDVLAVGDGA NDLGMLHLAGTGVALHAKPAVQEQAKHRVNHANLTALLFIQGYAKADFVTP
Sequences:
>Translated_291_residues MFTVTLMTNHAMYLDGSLVTNLVKAMNAEAPRWLDPNHCAEFDTPKIPKNIQTVWESLSAEGVDLVWQKAGDRKKRMLLA DMDSTMIQQECIDELADEAGVGKRVADITARAMNGELEFEDALLERVGLLKGLSEATIATVLEKRITLMPGGDVLLATMK ANGAHCALVSGGFTAFTSAIAAKLGFDEHHANTLLAENGALTGDVARPILGRDAKVDALTRITKTLGIKPKDVLAVGDGA NDLGMLHLAGTGVALHAKPAVQEQAKHRVNHANLTALLFIQGYAKADFVTP >Mature_291_residues MFTVTLMTNHAMYLDGSLVTNLVKAMNAEAPRWLDPNHCAEFDTPKIPKNIQTVWESLSAEGVDLVWQKAGDRKKRMLLA DMDSTMIQQECIDELADEAGVGKRVADITARAMNGELEFEDALLERVGLLKGLSEATIATVLEKRITLMPGGDVLLATMK ANGAHCALVSGGFTAFTSAIAAKLGFDEHHANTLLAENGALTGDVARPILGRDAKVDALTRITKTLGIKPKDVLAVGDGA NDLGMLHLAGTGVALHAKPAVQEQAKHRVNHANLTALLFIQGYAKADFVTP
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=167, Percent_Identity=32.3353293413174, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1790849, Length=208, Percent_Identity=42.3076923076923, Blast_Score=149, Evalue=2e-37, Organism=Caenorhabditis elegans, GI115534456, Length=212, Percent_Identity=34.4339622641509, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115534454, Length=212, Percent_Identity=34.4339622641509, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI115534458, Length=214, Percent_Identity=33.6448598130841, Blast_Score=81, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6321647, Length=210, Percent_Identity=37.6190476190476, Blast_Score=137, Evalue=1e-33, Organism=Drosophila melanogaster, GI24661601, Length=206, Percent_Identity=29.6116504854369, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 31132; Mature: 31132
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVTLMTNHAMYLDGSLVTNLVKAMNAEAPRWLDPNHCAEFDTPKIPKNIQTVWESLSA CEEEEEEECCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC EGVDLVWQKAGDRKKRMLLADMDSTMIQQECIDELADEAGVGKRVADITARAMNGELEFE CCHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH DALLERVGLLKGLSEATIATVLEKRITLMPGGDVLLATMKANGAHCALVSGGFTAFTSAI HHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEECCHHHHHHHH AAKLGFDEHHANTLLAENGALTGDVARPILGRDAKVDALTRITKTLGIKPKDVLAVGDGA HHHCCCCHHHCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEEEECCCC NDLGMLHLAGTGVALHAKPAVQEQAKHRVNHANLTALLFIQGYAKADFVTP CCCEEEEEECCCEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC >Mature Secondary Structure MFTVTLMTNHAMYLDGSLVTNLVKAMNAEAPRWLDPNHCAEFDTPKIPKNIQTVWESLSA CEEEEEEECCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC EGVDLVWQKAGDRKKRMLLADMDSTMIQQECIDELADEAGVGKRVADITARAMNGELEFE CCHHHHHHCCCCHHHEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH DALLERVGLLKGLSEATIATVLEKRITLMPGGDVLLATMKANGAHCALVSGGFTAFTSAI HHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEECCHHHHHHHH AAKLGFDEHHANTLLAENGALTGDVARPILGRDAKVDALTRITKTLGIKPKDVLAVGDGA HHHCCCCHHHCCEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEEEECCCC NDLGMLHLAGTGVALHAKPAVQEQAKHRVNHANLTALLFIQGYAKADFVTP CCCEEEEEECCCEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]