Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052730

Identifier: 89052730

GI number: 89052730

Start: 233800

End: 234648

Strand: Direct

Name: 89052730

Synonym: Jann_0239

Alternate gene names: NA

Gene position: 233800-234648 (Clockwise)

Preceding gene: 89052727

Following gene: 89052732

Centisome position: 5.41

GC content: 47.35

Gene sequence:

>849_bases
ATGACGGTGTGCGTTGCGGTTAAGGTGCAGGATTGCATCGTGTTTGCTGCTGATAGCACCACCTCCCTACAAGCTGTTGG
AGCCAACGGCGAACATGTGACCATGAACACATACGATCATGCAAACAAACTCTTTAATCTGAGAAAGGGATGCCCTGTCG
CTGCCATGACGGCAGGGATTGGTAACTTTGGAGGATCTTCCATCTCTACGGTGTCCAAAGATTTTCGATCCCTTATTGAT
CGGCGTGCAGAGGGATATGCTTTGAACTGGGAGAACTACACAATTGAAGAAATTGTTGGCCTGGCGCGTAAGTACTTCTT
TGAAGAGCGCTTCTCTTCACTTTCAGAGAAGCCTCAAGGAAGTTTTCAATACTGGGTTGGCGGCTATTCTTCTGGAGAAC
AAATGGGCGAAGTTTGGCAATTTCAGATTCATAATGGAGAATGCTTAGAGCCACAGTGTTCAATTTCACGTAATGTCGCA
TCTGGTCTTGCATGGGGTGGTGCACCAGAGGCCATAAATCGCTTGATCCTAGGATATGGACAGCGGATCGGCGATGCTTT
GGTTGAGGGAGGGCTTGATGCCTCCCTTGTTCCACAGGCCATTGATGGAATTGCGCGATATACCCAATGCTCACTTGTAC
ATGCAGCGATGCCGACTGGGGATGCGATTGATCTTGCAAAATTTCTAGCCGAAACGACCAAGCAATTTGTCAGATTCATG
CCTGGTAGTAATTCAGTGGGTGGCGACCTCGATATTGCCACAATCACTAAGCATGAAAATTTTAAGTGGATCGCAAGAAA
GCACTTCTACAATACTCGCATCAATCCATTGGAGACCAACCATGCCTAA

Upstream 100 bases:

>100_bases
CATGGACTGAATGTCCAAGTCATTGATGCTGAGTCCTTTTTCTGTCGTTGCCCGCAGGCGAGAGAAATGATTCACTTGCG
GTAGCCAGAGGGGGATCAAA

Downstream 100 bases:

>100_bases
TCTAAACGATGGAACAACAAGAGCGCTTACGGTAGATCCGCAGCCTCGGCGAGACTTGACCATGCCTCCTATGGTTTCAT
CTCGTACTGATAGTGCATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MTVCVAVKVQDCIVFAADSTTSLQAVGANGEHVTMNTYDHANKLFNLRKGCPVAAMTAGIGNFGGSSISTVSKDFRSLID
RRAEGYALNWENYTIEEIVGLARKYFFEERFSSLSEKPQGSFQYWVGGYSSGEQMGEVWQFQIHNGECLEPQCSISRNVA
SGLAWGGAPEAINRLILGYGQRIGDALVEGGLDASLVPQAIDGIARYTQCSLVHAAMPTGDAIDLAKFLAETTKQFVRFM
PGSNSVGGDLDIATITKHENFKWIARKHFYNTRINPLETNHA

Sequences:

>Translated_282_residues
MTVCVAVKVQDCIVFAADSTTSLQAVGANGEHVTMNTYDHANKLFNLRKGCPVAAMTAGIGNFGGSSISTVSKDFRSLID
RRAEGYALNWENYTIEEIVGLARKYFFEERFSSLSEKPQGSFQYWVGGYSSGEQMGEVWQFQIHNGECLEPQCSISRNVA
SGLAWGGAPEAINRLILGYGQRIGDALVEGGLDASLVPQAIDGIARYTQCSLVHAAMPTGDAIDLAKFLAETTKQFVRFM
PGSNSVGGDLDIATITKHENFKWIARKHFYNTRINPLETNHA
>Mature_281_residues
TVCVAVKVQDCIVFAADSTTSLQAVGANGEHVTMNTYDHANKLFNLRKGCPVAAMTAGIGNFGGSSISTVSKDFRSLIDR
RAEGYALNWENYTIEEIVGLARKYFFEERFSSLSEKPQGSFQYWVGGYSSGEQMGEVWQFQIHNGECLEPQCSISRNVAS
GLAWGGAPEAINRLILGYGQRIGDALVEGGLDASLVPQAIDGIARYTQCSLVHAAMPTGDAIDLAKFLAETTKQFVRFMP
GSNSVGGDLDIATITKHENFKWIARKHFYNTRINPLETNHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30805; Mature: 30674

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVCVAVKVQDCIVFAADSTTSLQAVGANGEHVTMNTYDHANKLFNLRKGCPVAAMTAGI
CEEEEEEEEEEEEEEECCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHCC
GNFGGSSISTVSKDFRSLIDRRAEGYALNWENYTIEEIVGLARKYFFEERFSSLSEKPQG
CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SFQYWVGGYSSGEQMGEVWQFQIHNGECLEPQCSISRNVASGLAWGGAPEAINRLILGYG
CEEEEECCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QRIGDALVEGGLDASLVPQAIDGIARYTQCSLVHAAMPTGDAIDLAKFLAETTKQFVRFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
PGSNSVGGDLDIATITKHENFKWIARKHFYNTRINPLETNHA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TVCVAVKVQDCIVFAADSTTSLQAVGANGEHVTMNTYDHANKLFNLRKGCPVAAMTAGI
EEEEEEEEEEEEEEECCCCCEEEEECCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHCC
GNFGGSSISTVSKDFRSLIDRRAEGYALNWENYTIEEIVGLARKYFFEERFSSLSEKPQG
CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SFQYWVGGYSSGEQMGEVWQFQIHNGECLEPQCSISRNVASGLAWGGAPEAINRLILGYG
CEEEEECCCCCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QRIGDALVEGGLDASLVPQAIDGIARYTQCSLVHAAMPTGDAIDLAKFLAETTKQFVRFM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
PGSNSVGGDLDIATITKHENFKWIARKHFYNTRINPLETNHA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA