| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is ytzA [H]
Identifier: 89052683
GI number: 89052683
Start: 184641
End: 185162
Strand: Direct
Name: ytzA [H]
Synonym: Jann_0192
Alternate gene names: 89052683
Gene position: 184641-185162 (Clockwise)
Preceding gene: 89052679
Following gene: 89052684
Centisome position: 4.28
GC content: 60.54
Gene sequence:
>522_bases TTGGCTCACCCGGATTGCGGCAACGGCGCCGCGCAACGGCTGAAAGGCACGATAACAATGTGGCTGTTTATCCTGTTCAT CGCAATTCCGCTGATCGAGATCGGGTTGTTCATCCAGGTGGGGGGCTGGCTGGGTCTGTGGCCGACGCTTCTGATCGTCG TTCTGACGGCCATTGCCGGAACAGCCTTGGTCAAAAGCCAGGGCAAGCAGGCGATTGCGCAGCTGCGCAGCAGTTTTGAT GATCTGCGTGACCCGACGGAGCCGCTGGCCCATGGGGCAATGATCCTGTTTTCCGGTGCGCTGCTTCTGACGCCCGGGTT CTTTACGGACTTTGTTGGGTTTGCGCTGTTGATCCCCGCCGTCAGGCGCGCCGTGCTGAAAGAAGTGAAGAAACGCGTGA AGGTGGAAACGGTTCGGACGGATCGTGGGTGGCAACCCCAGGACGAAACTATCATCGAGGGTACGTTCACGGCAGAGGAG GGCGAGCGCCCCTCCGGCCCATCGGGTTGGCGCAGGGATTGA
Upstream 100 bases:
>100_bases CGCGGCGTGTGGGTTAAAAACGTCTTCGTGAGGCACATATGTAGGGCAGGGGTGGTATCAAGTCCATCGCGCGTGCTCCA TCGCGCGTGCGCGTGAACGA
Downstream 100 bases:
>100_bases GGCTCAGCAAAGGGCCTGCTAAAGCACCAGCGACCTCGATTTAAGGAGAATCCAATGTCCGACGCCTCTGCAAACGGCGA CGCAACCGAAGGCGCCGCAC
Product: FxsA cytoplasmic membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MAHPDCGNGAAQRLKGTITMWLFILFIAIPLIEIGLFIQVGGWLGLWPTLLIVVLTAIAGTALVKSQGKQAIAQLRSSFD DLRDPTEPLAHGAMILFSGALLLTPGFFTDFVGFALLIPAVRRAVLKEVKKRVKVETVRTDRGWQPQDETIIEGTFTAEE GERPSGPSGWRRD
Sequences:
>Translated_173_residues MAHPDCGNGAAQRLKGTITMWLFILFIAIPLIEIGLFIQVGGWLGLWPTLLIVVLTAIAGTALVKSQGKQAIAQLRSSFD DLRDPTEPLAHGAMILFSGALLLTPGFFTDFVGFALLIPAVRRAVLKEVKKRVKVETVRTDRGWQPQDETIIEGTFTAEE GERPSGPSGWRRD >Mature_172_residues AHPDCGNGAAQRLKGTITMWLFILFIAIPLIEIGLFIQVGGWLGLWPTLLIVVLTAIAGTALVKSQGKQAIAQLRSSFDD LRDPTEPLAHGAMILFSGALLLTPGFFTDFVGFALLIPAVRRAVLKEVKKRVKVETVRTDRGWQPQDETIIEGTFTAEEG ERPSGPSGWRRD
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 18924; Mature: 18793
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPDCGNGAAQRLKGTITMWLFILFIAIPLIEIGLFIQVGGWLGLWPTLLIVVLTAIAG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TALVKSQGKQAIAQLRSSFDDLRDPTEPLAHGAMILFSGALLLTPGFFTDFVGFALLIPA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VRRAVLKEVKKRVKVETVRTDRGWQPQDETIIEGTFTAEEGERPSGPSGWRRD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AHPDCGNGAAQRLKGTITMWLFILFIAIPLIEIGLFIQVGGWLGLWPTLLIVVLTAIAG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TALVKSQGKQAIAQLRSSFDDLRDPTEPLAHGAMILFSGALLLTPGFFTDFVGFALLIPA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH VRRAVLKEVKKRVKVETVRTDRGWQPQDETIIEGTFTAEEGERPSGPSGWRRD HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]