Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052677

Identifier: 89052677

GI number: 89052677

Start: 178695

End: 179783

Strand: Direct

Name: 89052677

Synonym: Jann_0186

Alternate gene names: NA

Gene position: 178695-179783 (Clockwise)

Preceding gene: 89052676

Following gene: 89052678

Centisome position: 4.14

GC content: 59.78

Gene sequence:

>1089_bases
ATGAGTGACGTCACCCGCGATGACCTGCGCGCCGCAATAGGCGCTGGCCTGATGACGGAGGCGCAGGCAGCCTCCCTCAT
TTCGCTGGCGGAAGAACGGGAAGGCGTGCGCGCCAGACGCTCCGGCCTGGACGAGCCGTTTGAGCTGTTCAAAGGCTTCA
ACGAGATCTTCATCGTCGTGGGTCTTTCAATCCTGTTCGCGGGCTGGGTCGGCGTCACCGGGCTGTCCGTTTTCGGATCA
AACAACGGCTACGTCCTTGGCATGCTCTTTTCGCTCGTAGCGGCGGGCGTTGTAATCCTGCTGGCACGCTACTTCACGAT
CACACGGCGCATGGTGGCCCCATCCATCGCGCTGGCCGTGATGTTTGGCCTTTCCGCGTTACAATTCGGCCTGTCATTCG
CGGCCATGCTGGATCTGGTATTTCAATCCAGCTGGACGGTCGCCGCGGGAATCTCGGGCCTGTTTCTGTGCCTCTACTAC
TTCCTGTTCCGGGTCCCTTTCACCGTCGCGCTAATCGCCGCATCGGTCGTGATCCTTTGTTTCGGACTCGTCACTATGGG
CGGAACCGTCCCGGATGAGATGCAGGACATCTTCCTGCTGTCCGCCGACGGACCTTTCGCCATTATTACCATTGTCCTGG
GCGTGATCGGTTTGGTTATCGCGATGGCGTTTGACATGAACGATCCACACCGCGTGACACGACGGGCCGCATCTGGGTTC
TGGCTTCATGTCATGGCGGCCCCTGCGATCGTGAATACCGTTGCCCTGACGCTGTTCCAAAGCCCCGACGCGGGCATAAG
ATTGCTCCTCTTGCTCTTCATCGCGGTGATGGCGCTCTTTGCGATCATTATCGACCGCCGGTCGTTCCTTGTATCCGGGG
TCGGTTATGTCGTGGCGCTTTCAATCTCTGTCGTCGAGGGGGAGGGCGCCTTCTTCGTCATCCTTCTTCTCGGCGCAGGC
ATGGTCTTGCTTGGCGCCCAATGGGAACGCCTGCGCGGCGTGATCATGCGGGCGCTTCCCCGCTTTCCTGGAAAAACACG
CTTGCCCCCATGGTCTGATCCTGGGGCAGCAAAGGAGACTCTTGCATGA

Upstream 100 bases:

>100_bases
GTGACAAGGATGCCGAAGCCGTCGCCCGGGATGCCATGGCGATTGCCTCGGATATTTGCGTCTATACCAACGGCAATCTT
ACTGTTGAGACGATCTCTGC

Downstream 100 bases:

>100_bases
GTGATCTGACCCCCCGCGAAATCGTCTCGGAACTTGACCGGTTCATCATTGGCCAGTCCGACGCCAAACGCGCCGTGGCC
GTGGCCTTGCGCAATCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGS
NNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYY
FLFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF
WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAG
MVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA

Sequences:

>Translated_362_residues
MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGS
NNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYY
FLFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF
WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAG
MVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA
>Mature_361_residues
SDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGSN
NGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYF
LFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGFW
LHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAGM
VLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38711; Mature: 38579

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVV
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHH
GLSILFAGWVGVTGLSVFGSNNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAV
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYFLFRVPFTVALIAASVVILC
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF
HHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVAL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
SISVVEGEGAFFVILLLGAGMVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKET
EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC
LA
CC
>Mature Secondary Structure 
SDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVV
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHH
GLSILFAGWVGVTGLSVFGSNNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAV
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYFLFRVPFTVALIAASVVILC
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF
HHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVAL
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
SISVVEGEGAFFVILLLGAGMVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKET
EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA