| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052677
Identifier: 89052677
GI number: 89052677
Start: 178695
End: 179783
Strand: Direct
Name: 89052677
Synonym: Jann_0186
Alternate gene names: NA
Gene position: 178695-179783 (Clockwise)
Preceding gene: 89052676
Following gene: 89052678
Centisome position: 4.14
GC content: 59.78
Gene sequence:
>1089_bases ATGAGTGACGTCACCCGCGATGACCTGCGCGCCGCAATAGGCGCTGGCCTGATGACGGAGGCGCAGGCAGCCTCCCTCAT TTCGCTGGCGGAAGAACGGGAAGGCGTGCGCGCCAGACGCTCCGGCCTGGACGAGCCGTTTGAGCTGTTCAAAGGCTTCA ACGAGATCTTCATCGTCGTGGGTCTTTCAATCCTGTTCGCGGGCTGGGTCGGCGTCACCGGGCTGTCCGTTTTCGGATCA AACAACGGCTACGTCCTTGGCATGCTCTTTTCGCTCGTAGCGGCGGGCGTTGTAATCCTGCTGGCACGCTACTTCACGAT CACACGGCGCATGGTGGCCCCATCCATCGCGCTGGCCGTGATGTTTGGCCTTTCCGCGTTACAATTCGGCCTGTCATTCG CGGCCATGCTGGATCTGGTATTTCAATCCAGCTGGACGGTCGCCGCGGGAATCTCGGGCCTGTTTCTGTGCCTCTACTAC TTCCTGTTCCGGGTCCCTTTCACCGTCGCGCTAATCGCCGCATCGGTCGTGATCCTTTGTTTCGGACTCGTCACTATGGG CGGAACCGTCCCGGATGAGATGCAGGACATCTTCCTGCTGTCCGCCGACGGACCTTTCGCCATTATTACCATTGTCCTGG GCGTGATCGGTTTGGTTATCGCGATGGCGTTTGACATGAACGATCCACACCGCGTGACACGACGGGCCGCATCTGGGTTC TGGCTTCATGTCATGGCGGCCCCTGCGATCGTGAATACCGTTGCCCTGACGCTGTTCCAAAGCCCCGACGCGGGCATAAG ATTGCTCCTCTTGCTCTTCATCGCGGTGATGGCGCTCTTTGCGATCATTATCGACCGCCGGTCGTTCCTTGTATCCGGGG TCGGTTATGTCGTGGCGCTTTCAATCTCTGTCGTCGAGGGGGAGGGCGCCTTCTTCGTCATCCTTCTTCTCGGCGCAGGC ATGGTCTTGCTTGGCGCCCAATGGGAACGCCTGCGCGGCGTGATCATGCGGGCGCTTCCCCGCTTTCCTGGAAAAACACG CTTGCCCCCATGGTCTGATCCTGGGGCAGCAAAGGAGACTCTTGCATGA
Upstream 100 bases:
>100_bases GTGACAAGGATGCCGAAGCCGTCGCCCGGGATGCCATGGCGATTGCCTCGGATATTTGCGTCTATACCAACGGCAATCTT ACTGTTGAGACGATCTCTGC
Downstream 100 bases:
>100_bases GTGATCTGACCCCCCGCGAAATCGTCTCGGAACTTGACCGGTTCATCATTGGCCAGTCCGACGCCAAACGCGCCGTGGCC GTGGCCTTGCGCAATCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGS NNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYY FLFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAG MVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA
Sequences:
>Translated_362_residues MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGS NNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYY FLFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAG MVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA >Mature_361_residues SDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVVGLSILFAGWVGVTGLSVFGSN NGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAVMFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYF LFRVPFTVALIAASVVILCFGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGFW LHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVALSISVVEGEGAFFVILLLGAGM VLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKETLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38711; Mature: 38579
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVV CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHH GLSILFAGWVGVTGLSVFGSNNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAV HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYFLFRVPFTVALIAASVVILC HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF HHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVAL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE SISVVEGEGAFFVILLLGAGMVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKET EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC LA CC >Mature Secondary Structure SDVTRDDLRAAIGAGLMTEAQAASLISLAEEREGVRARRSGLDEPFELFKGFNEIFIVV CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHHHHHHH GLSILFAGWVGVTGLSVFGSNNGYVLGMLFSLVAAGVVILLARYFTITRRMVAPSIALAV HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFGLSALQFGLSFAAMLDLVFQSSWTVAAGISGLFLCLYYFLFRVPFTVALIAASVVILC HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGLVTMGGTVPDEMQDIFLLSADGPFAIITIVLGVIGLVIAMAFDMNDPHRVTRRAASGF HHHHHCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH WLHVMAAPAIVNTVALTLFQSPDAGIRLLLLLFIAVMALFAIIIDRRSFLVSGVGYVVAL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE SISVVEGEGAFFVILLLGAGMVLLGAQWERLRGVIMRALPRFPGKTRLPPWSDPGAAKET EEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHC LA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA