| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is bchF [H]
Identifier: 89052653
GI number: 89052653
Start: 154787
End: 155266
Strand: Reverse
Name: bchF [H]
Synonym: Jann_0162
Alternate gene names: 89052653
Gene position: 155266-154787 (Counterclockwise)
Preceding gene: 89052661
Following gene: 89052652
Centisome position: 3.6
GC content: 60.62
Gene sequence:
>480_bases ATGACGACCGACACCATGACCGGGCTGCCTGCCTCGCAGCTCTATACACCCGAGGAACGCGCCCGGCGCGACGCCACCGT CTGGACATTGGTTCAAGGGGTCCTGGCTCCGGTGCAATTCCTGGTCTTCCTGATCTCCCTGGTGCTGGTCACGCGCTACC TTTTGACGGGAAGCGGATATGAGGCGGCGACGCTGTCGATCATCACCAAGACGCTTCTGCTTTTGACCATCATGGTGACC GGCGCGATCTGGGAAAAAGTCGTTTTCGGCCAATGGCTTTTCGCCCCTGCGTTCTTCTGGGAAGACGTCTTTTCCTTCCT CGTGATCGCATTGCATCTGACCTATGTCTGGGCGCTGCTCAGCGGCTGGTCGGCGCCGACCCAAATGTGGATCGCATTGG CGGCCTACGCGGCCTATGTCATCAACGCCGGGCAGTTCCTCTGGAAGCTGCGCCAAGCCCGTCTTGGAGCGCCCGCATGA
Upstream 100 bases:
>100_bases GGTTGGTGTGACACATCCAATTGCAAGTGTAAGTTTAGATTGACACTCTTAACCTTACAGACCTAATTTCTAAGCAGGGC CTGGAGGAATCGATAATCCC
Downstream 100 bases:
>100_bases ACACGCCCAAGAGCATTCCATCGGGCACCTGCCGCGACACACCAGTCCTGAAAGAGCGCGGCCAGCGCGAGGTCTTTTGC GGCCTGACGGGCATCATCTG
Product: 2-vinyl bacteriochlorophyllide hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTTDTMTGLPASQLYTPEERARRDATVWTLVQGVLAPVQFLVFLISLVLVTRYLLTGSGYEAATLSIITKTLLLLTIMVT GAIWEKVVFGQWLFAPAFFWEDVFSFLVIALHLTYVWALLSGWSAPTQMWIALAAYAAYVINAGQFLWKLRQARLGAPA
Sequences:
>Translated_159_residues MTTDTMTGLPASQLYTPEERARRDATVWTLVQGVLAPVQFLVFLISLVLVTRYLLTGSGYEAATLSIITKTLLLLTIMVT GAIWEKVVFGQWLFAPAFFWEDVFSFLVIALHLTYVWALLSGWSAPTQMWIALAAYAAYVINAGQFLWKLRQARLGAPA >Mature_158_residues TTDTMTGLPASQLYTPEERARRDATVWTLVQGVLAPVQFLVFLISLVLVTRYLLTGSGYEAATLSIITKTLLLLTIMVTG AIWEKVVFGQWLFAPAFFWEDVFSFLVIALHLTYVWALLSGWSAPTQMWIALAAYAAYVINAGQFLWKLRQARLGAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009905 [H]
Pfam domain/function: PF07284 BCHF [H]
EC number: NA
Molecular weight: Translated: 17735; Mature: 17604
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDTMTGLPASQLYTPEERARRDATVWTLVQGVLAPVQFLVFLISLVLVTRYLLTGSGY CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAATLSIITKTLLLLTIMVTGAIWEKVVFGQWLFAPAFFWEDVFSFLVIALHLTYVWALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGWSAPTQMWIALAAYAAYVINAGQFLWKLRQARLGAPA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTDTMTGLPASQLYTPEERARRDATVWTLVQGVLAPVQFLVFLISLVLVTRYLLTGSGY CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EAATLSIITKTLLLLTIMVTGAIWEKVVFGQWLFAPAFFWEDVFSFLVIALHLTYVWALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGWSAPTQMWIALAAYAAYVINAGQFLWKLRQARLGAPA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8385667 [H]