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The map label for this gene is 89052639

Identifier: 89052639

GI number: 89052639

Start: 139246

End: 139692

Strand: Reverse

Name: 89052639

Synonym: Jann_0148

Alternate gene names: NA

Gene position: 139692-139246 (Counterclockwise)

Preceding gene: 89052640

Following gene: 89052634

Centisome position: 3.24

GC content: 63.53

Gene sequence:

>447_bases
ATGCAGCGACTAACTGTTCTCGCCACGGCGGCAACACTCCTTGCGGCGCCGGTACTGGCTGACGGCCATGCCACGGGCGA
CGCAGAAGCTGGCGAGCGCGCGTTCCGTCAGTGCATTTCCTGCCACGTGGTTGTGGATGCGGACGGCGAAACTCTGGCCG
GACGCAATGCGCGCACCGGTCCGAACCTCTATGGCATTCACGGGCGCCCTATCGGGTCTGTTGAAGACTTCCGGTATTCC
AACGGTCTGACGGCCCTGATGGAAGCGGGGATGGAATGGGACGAGGCGGCGTTTGTTGGCTACGTCCAAGACCCAACCGG
CTGGATTCGCGAAGCCGCAGATGACGACAGCCTGCGCGGCGCGATGAGCTTCCGGGTTCGCTCGGAAGAGGATGCGCTGA
ACCTCTACGCCTATCTCGTGTCCCTGGGTGGACCCGAGGCGGAGTAA

Upstream 100 bases:

>100_bases
GTAATGACGCCTAACACCCGAAAAAGTCACAAAAAGGTGTGGACGAACCCGGTGAAACATTAGGTATACAGGGGTGAGCA
CTTAATTAGGGAGACTACCC

Downstream 100 bases:

>100_bases
CCCGCACAGCTGACGGCAAGATTTTGCGGGCGGTCCAGGTTGGGCCGCCCGTTCTACGTTTGGGTGAATGCCCTGATGTG
GGTCGCGACCCTCTCAGGCG

Product: cytochrome c, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MQRLTVLATAATLLAAPVLADGHATGDAEAGERAFRQCISCHVVVDADGETLAGRNARTGPNLYGIHGRPIGSVEDFRYS
NGLTALMEAGMEWDEAAFVGYVQDPTGWIREAADDDSLRGAMSFRVRSEEDALNLYAYLVSLGGPEAE

Sequences:

>Translated_148_residues
MQRLTVLATAATLLAAPVLADGHATGDAEAGERAFRQCISCHVVVDADGETLAGRNARTGPNLYGIHGRPIGSVEDFRYS
NGLTALMEAGMEWDEAAFVGYVQDPTGWIREAADDDSLRGAMSFRVRSEEDALNLYAYLVSLGGPEAE
>Mature_148_residues
MQRLTVLATAATLLAAPVLADGHATGDAEAGERAFRQCISCHVVVDADGETLAGRNARTGPNLYGIHGRPIGSVEDFRYS
NGLTALMEAGMEWDEAAFVGYVQDPTGWIREAADDDSLRGAMSFRVRSEEDALNLYAYLVSLGGPEAE

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15792; Mature: 15792

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLTVLATAATLLAAPVLADGHATGDAEAGERAFRQCISCHVVVDADGETLAGRNARTG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEECCCCCCCC
PNLYGIHGRPIGSVEDFRYSNGLTALMEAGMEWDEAAFVGYVQDPTGWIREAADDDSLRG
CCEEEECCCCCCCHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCC
AMSFRVRSEEDALNLYAYLVSLGGPEAE
EEEEEEECCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQRLTVLATAATLLAAPVLADGHATGDAEAGERAFRQCISCHVVVDADGETLAGRNARTG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCEECCCCCCCC
PNLYGIHGRPIGSVEDFRYSNGLTALMEAGMEWDEAAFVGYVQDPTGWIREAADDDSLRG
CCEEEECCCCCCCHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCC
AMSFRVRSEEDALNLYAYLVSLGGPEAE
EEEEEEECCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA