| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is crtA [H]
Identifier: 89052635
GI number: 89052635
Start: 134918
End: 135643
Strand: Direct
Name: crtA [H]
Synonym: Jann_0144
Alternate gene names: 89052635
Gene position: 134918-135643 (Clockwise)
Preceding gene: 89052632
Following gene: 89052636
Centisome position: 3.12
GC content: 63.77
Gene sequence:
>726_bases ATGCAATCGACGACCTTGAGCCTGTATCGTTTCGGCTCTACCTCTGCGCGCCTTTGGGCGTTTGCTCAGATGGGTTTGGC CCGTCCTGCGATGCGCGATGTGCGCGGCATCGGGACGTGGAAGTTGTGCGGATCGGGCACCGGAGAGGGGTTCACGCCCC TGCCCAATACGTCTGTCTATGCGATTCTCGCCACCTGGCCAGATCACGATACGGCGCGCCGGGCTTTGTTCGGTGCGGGC GTGTTTCGGCGGTACGCTGCGCGATCCAGTGAGGCAATGACCTTGTTTCTGACCTCGACCTCCGCGCGGGGCACCTGGGC GGGCACGGAACCATTCGCCACGTCCGGCGATCCAGGCGGACCCATCGCCGCGCTGACCCGCGCCACGATCAAACCGCGCA TCGCCGCGAAGTTCTGGGGCCGCGTGCCGGGCATTTCTACCGCCATCGGCAATGATCCCAATGTCCTGTTCAAGATCGGC ATCGGAGAGGTTCCGATGCTGCATCAGGTCACCTTCTCGATCTGGCCGGATGCCACTTCCATGGCAGACTTTGCCCGCAA AGACGGCCCCCACGCCAAGGCGATCCACGCCGTCCGGTCCGAGGGTTGGTTCAAGGAAGAGCTTTACGCGCGGTTCAACG TCGACGCGGTGGACGGCACCTGGGACGGCGCGACACCGGACTTCGCGTCAAGGCCCGTCGCAGACACAAGGATAGCAGCT GAATGA
Upstream 100 bases:
>100_bases AGTTGACACTAAGGTGAGATCTCGCGTTTTGCAAAGGTGATTTGACTTCACTAACCGCGACCAATGTGTCAGACTTGGTT GACACATGGAGCGACCAACC
Downstream 100 bases:
>100_bases AAGATATCATGGAACCTGGTCCCTTCCCCTTCTCGGCCATTGTCGGCCAGGAAGAGATGAAACGCGCCATGATCCTGACC GCGATTGATGCGGGCATTGG
Product: spheroidene monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MQSTTLSLYRFGSTSARLWAFAQMGLARPAMRDVRGIGTWKLCGSGTGEGFTPLPNTSVYAILATWPDHDTARRALFGAG VFRRYAARSSEAMTLFLTSTSARGTWAGTEPFATSGDPGGPIAALTRATIKPRIAAKFWGRVPGISTAIGNDPNVLFKIG IGEVPMLHQVTFSIWPDATSMADFARKDGPHAKAIHAVRSEGWFKEELYARFNVDAVDGTWDGATPDFASRPVADTRIAA E
Sequences:
>Translated_241_residues MQSTTLSLYRFGSTSARLWAFAQMGLARPAMRDVRGIGTWKLCGSGTGEGFTPLPNTSVYAILATWPDHDTARRALFGAG VFRRYAARSSEAMTLFLTSTSARGTWAGTEPFATSGDPGGPIAALTRATIKPRIAAKFWGRVPGISTAIGNDPNVLFKIG IGEVPMLHQVTFSIWPDATSMADFARKDGPHAKAIHAVRSEGWFKEELYARFNVDAVDGTWDGATPDFASRPVADTRIAA E >Mature_241_residues MQSTTLSLYRFGSTSARLWAFAQMGLARPAMRDVRGIGTWKLCGSGTGEGFTPLPNTSVYAILATWPDHDTARRALFGAG VFRRYAARSSEAMTLFLTSTSARGTWAGTEPFATSGDPGGPIAALTRATIKPRIAAKFWGRVPGISTAIGNDPNVLFKIG IGEVPMLHQVTFSIWPDATSMADFARKDGPHAKAIHAVRSEGWFKEELYARFNVDAVDGTWDGATPDFASRPVADTRIAA E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25960; Mature: 25960
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTTLSLYRFGSTSARLWAFAQMGLARPAMRDVRGIGTWKLCGSGTGEGFTPLPNTSVY CCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE AILATWPDHDTARRALFGAGVFRRYAARSSEAMTLFLTSTSARGTWAGTEPFATSGDPGG EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PIAALTRATIKPRIAAKFWGRVPGISTAIGNDPNVLFKIGIGEVPMLHQVTFSIWPDATS CHHHHHHHHCCCHHHHHHHCCCCCCCEECCCCCCEEEEECCCCCCHHEEEEEEECCCHHH MADFARKDGPHAKAIHAVRSEGWFKEELYARFNVDAVDGTWDGATPDFASRPVADTRIAA HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHEECCEECCCCCCCCCCCCCCCCCCCCEECC E C >Mature Secondary Structure MQSTTLSLYRFGSTSARLWAFAQMGLARPAMRDVRGIGTWKLCGSGTGEGFTPLPNTSVY CCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEE AILATWPDHDTARRALFGAGVFRRYAARSSEAMTLFLTSTSARGTWAGTEPFATSGDPGG EEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC PIAALTRATIKPRIAAKFWGRVPGISTAIGNDPNVLFKIGIGEVPMLHQVTFSIWPDATS CHHHHHHHHCCCHHHHHHHCCCCCCCEECCCCCCEEEEECCCCCCHHEEEEEEECCCHHH MADFARKDGPHAKAIHAVRSEGWFKEELYARFNVDAVDGTWDGATPDFASRPVADTRIAA HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHEECCEECCCCCCCCCCCCCCCCCCCCEECC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2747617 [H]