| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is sam [H]
Identifier: 89052632
GI number: 89052632
Start: 131369
End: 132238
Strand: Direct
Name: sam [H]
Synonym: Jann_0141
Alternate gene names: 89052632
Gene position: 131369-132238 (Clockwise)
Preceding gene: 89052631
Following gene: 89052635
Centisome position: 3.04
GC content: 61.95
Gene sequence:
>870_bases ATGACGGACAATCCCCGTCTTGGCATCTACCTGATGATCGCCACCACCTTCGTCTTTGCCATGCAAGACGGCATCAGCCG GCATCTGGCAGGCGAATACAATATCTTCATGGTCGTGATGATCCGCTATTGGTTCTTCGCGGCCTTCGTCATCACCATCG CATCCCGTCAGGCGGGCGGCGTGCGCGCGGCGGCGAAAACAGAACAGCCCGTTCTACAGGCCTTCCGGGGCGTCCTTTTA GCGGCAGAAATCTGTGTGATGGTCGGCGCGTTCGTTCTGCTGGGTCTGGTGGAGGCCCACGCGATTTTCACCTGTTATCC GCTGCTGGTCGCCGCCCTGTCCGGCCCCGTACTGGGCGAAAAGGTCGGTTGGAGACGGTGGACGGCCATCGGTATCGGCT TTGTCGGCGTATTGGTGATCTTGCAACCGGGCTTTGGCGTCTTCTCGATTTACGCGCTGGTCCCCCTCGCCGCCGCCTTC ATGTTCGCGCTCTATAATCTGCTGACGCGGTACGCGGCCCGCAAGGATCGCGCTGCGACCAGCTTCTTCTGGACCGGAAC GGCGGGCGCACTCGTGATGACCTGCGTCGGCATCTGGTTCTGGGAGCCGATGAGCGGGCCGGATTGGGCTTGGATGGCGC TTCTGTGCGTCACCGGCGCGACCGGACATTTCCTGCTGATCAAGACTTATGACGTGGCCGAAGCGTCGGCCGTACAACCG TTCGCCTATCTGCAATTGGTCTTTGCATCCGCCCTCGGGCTTCTGGTGTTCGGCGAGGTCTTGGCGACAAACGTGGCCAT CGGGGCGGCGATCGTGATCTGTGCCGGGCTGTTCACGCTCTGGCGCACACGCACCGTGACGGGGGGCTGA
Upstream 100 bases:
>100_bases CCGTGGGGCGGATCAGGCGGACGCTTGCGGCGGCGGGCTTCACTGTCGAGCGCATCAAAGGCTTCAACGCAAAACCGCAC ATGACGCGGGGGGTCATGCC
Downstream 100 bases:
>100_bases TCATTCTGCCGCGTGGGGGCGGTCTTGCGCTTTCAGCTGAGACAGGACAGACAGCAACGGATCGCTCCACGCGTCCTTGT TGGGCGCGGGGTGGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTDNPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGGVRAAAKTEQPVLQAFRGVLL AAEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLGEKVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAF MFALYNLLTRYAARKDRAATSFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQP FAYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTRTVTGG
Sequences:
>Translated_289_residues MTDNPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGGVRAAAKTEQPVLQAFRGVLL AAEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLGEKVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAF MFALYNLLTRYAARKDRAATSFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQP FAYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTRTVTGG >Mature_288_residues TDNPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGGVRAAAKTEQPVLQAFRGVLLA AEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLGEKVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAFM FALYNLLTRYAARKDRAATSFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQPF AYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTRTVTGG
Specific function: Transports S-adenosylmethionine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31207; Mature: 31076
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VRAAAKTEQPVLQAFRGVLLAAEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLGE CHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAFMFALYNLLTRYAARKDRAAT HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQP EEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCH FAYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTRTVTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDNPRLGIYLMIATTFVFAMQDGISRHLAGEYNIFMVVMIRYWFFAAFVITIASRQAGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC VRAAAKTEQPVLQAFRGVLLAAEICVMVGAFVLLGLVEAHAIFTCYPLLVAALSGPVLGE CHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH KVGWRRWTAIGIGFVGVLVILQPGFGVFSIYALVPLAAAFMFALYNLLTRYAARKDRAAT HCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SFFWTGTAGALVMTCVGIWFWEPMSGPDWAWMALLCVTGATGHFLLIKTYDVAEASAVQP EEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHHHCCH FAYLQLVFASALGLLVFGEVLATNVAIGAAIVICAGLFTLWRTRTVTGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA