Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052612

Identifier: 89052612

GI number: 89052612

Start: 111761

End: 112567

Strand: Direct

Name: 89052612

Synonym: Jann_0121

Alternate gene names: NA

Gene position: 111761-112567 (Clockwise)

Preceding gene: 89052609

Following gene: 89052613

Centisome position: 2.59

GC content: 60.1

Gene sequence:

>807_bases
ATGAAACCCGTGTATCTGGCGCTGACCATTGCGGCTCTTGCTGTGACTGACAAGGCCACCGCCCATGAATTCTGGATCGA
TCCTGTAGATTTTACCGTCGCGGTCGGTGAGACGCTGGAAGCCGACTTGAGGGTGGGTCAGGACTTCTCGGGATCGCCGC
AAAGTTTCCTGCCCCGGTCCTTTGCGCTGTCGGTCGTTCTGAACGACGGAGAGGTTTACCGCGCCGACGGGCGTCTGGGG
GATATTCCCGCGCTAAGCCAGGATGGTCTGGCCGATGGGTTGGCGATCATCGTGCATCAGACCAACTCCACCGAGCTTGT
CTGGTCCGAATGGGAGAGGTTCCTGAATTTCGCCGAGCACAAAGATCTGGGCGACGTGACCGCCATGCATGAGGCGCGAA
ACCTGAGCCAGGAAAACGTGACCGAGGATTACATCCGCTACGCAAAATCCCTCGTCGCGATTGGCAGTGGCGCGGGGGCG
GACGGGCGTGTGGGTATGCGCGCCGAACTGGTCGCGCTGGTCAATCCCTACACGGACAGTATTGCAGGCGGTATGCCGAT
GCAGCTTTGGTACGATGACGCGTTGCAACCCGACTATCAGGTGGAGCTGTTTGCACAATCCGCCAGCGGCGCGGTGACCG
TCACCTACCACCGCACCAATGTCGATGGCGTCGTTGTGCTGCCGATCCAGCCCGGAATGACCTACATGGCCGACGCGGTC
TTTCTGGAAGCGGTGGAACCCACGCGGCCCGATGATGCCAGCTGGGTAACCCATTGGGCGAATATGACATTTTCGACTGC
GCCGTGA

Upstream 100 bases:

>100_bases
TTTCATGGGCCGTTGCTGGCACAGTTGTGAAGATAAGCGCCATTGACAGCAGGGCGCCGCGCAGCATGGTTATGCCAACC
ATTGTTAAAGGACCTTCTCG

Downstream 100 bases:

>100_bases
TGTGCGATGACCGCGTGGCCCATCGCGGCCTGACGTCTTGAAAGCCGTGCCATGACGACGCCCGCCCTGCCGCCAATCGC
GATGTTCTGGACGGGTGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG
DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA
DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV
FLEAVEPTRPDDASWVTHWANMTFSTAP

Sequences:

>Translated_268_residues
MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG
DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA
DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV
FLEAVEPTRPDDASWVTHWANMTFSTAP
>Mature_268_residues
MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG
DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA
DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV
FLEAVEPTRPDDASWVTHWANMTFSTAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29158; Mature: 29158

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRS
CCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCHHHHHHCCCCCCCCCHHHCCCE
FALSVVLNDGEVYRADGRLGDIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEH
EEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC
KDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGADGRVGMRAELVALVNPYTDS
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHH
IAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV
HCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH
FLEAVEPTRPDDASWVTHWANMTFSTAP
HEEECCCCCCCCCHHHHHHHCCEEECCC
>Mature Secondary Structure
MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRS
CCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCHHHHHHCCCCCCCCCHHHCCCE
FALSVVLNDGEVYRADGRLGDIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEH
EEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC
KDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGADGRVGMRAELVALVNPYTDS
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHH
IAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV
HCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH
FLEAVEPTRPDDASWVTHWANMTFSTAP
HEEECCCCCCCCCHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA