| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052612
Identifier: 89052612
GI number: 89052612
Start: 111761
End: 112567
Strand: Direct
Name: 89052612
Synonym: Jann_0121
Alternate gene names: NA
Gene position: 111761-112567 (Clockwise)
Preceding gene: 89052609
Following gene: 89052613
Centisome position: 2.59
GC content: 60.1
Gene sequence:
>807_bases ATGAAACCCGTGTATCTGGCGCTGACCATTGCGGCTCTTGCTGTGACTGACAAGGCCACCGCCCATGAATTCTGGATCGA TCCTGTAGATTTTACCGTCGCGGTCGGTGAGACGCTGGAAGCCGACTTGAGGGTGGGTCAGGACTTCTCGGGATCGCCGC AAAGTTTCCTGCCCCGGTCCTTTGCGCTGTCGGTCGTTCTGAACGACGGAGAGGTTTACCGCGCCGACGGGCGTCTGGGG GATATTCCCGCGCTAAGCCAGGATGGTCTGGCCGATGGGTTGGCGATCATCGTGCATCAGACCAACTCCACCGAGCTTGT CTGGTCCGAATGGGAGAGGTTCCTGAATTTCGCCGAGCACAAAGATCTGGGCGACGTGACCGCCATGCATGAGGCGCGAA ACCTGAGCCAGGAAAACGTGACCGAGGATTACATCCGCTACGCAAAATCCCTCGTCGCGATTGGCAGTGGCGCGGGGGCG GACGGGCGTGTGGGTATGCGCGCCGAACTGGTCGCGCTGGTCAATCCCTACACGGACAGTATTGCAGGCGGTATGCCGAT GCAGCTTTGGTACGATGACGCGTTGCAACCCGACTATCAGGTGGAGCTGTTTGCACAATCCGCCAGCGGCGCGGTGACCG TCACCTACCACCGCACCAATGTCGATGGCGTCGTTGTGCTGCCGATCCAGCCCGGAATGACCTACATGGCCGACGCGGTC TTTCTGGAAGCGGTGGAACCCACGCGGCCCGATGATGCCAGCTGGGTAACCCATTGGGCGAATATGACATTTTCGACTGC GCCGTGA
Upstream 100 bases:
>100_bases TTTCATGGGCCGTTGCTGGCACAGTTGTGAAGATAAGCGCCATTGACAGCAGGGCGCCGCGCAGCATGGTTATGCCAACC ATTGTTAAAGGACCTTCTCG
Downstream 100 bases:
>100_bases TGTGCGATGACCGCGTGGCCCATCGCGGCCTGACGTCTTGAAAGCCGTGCCATGACGACGCCCGCCCTGCCGCCAATCGC GATGTTCTGGACGGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV FLEAVEPTRPDDASWVTHWANMTFSTAP
Sequences:
>Translated_268_residues MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV FLEAVEPTRPDDASWVTHWANMTFSTAP >Mature_268_residues MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRSFALSVVLNDGEVYRADGRLG DIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEHKDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGA DGRVGMRAELVALVNPYTDSIAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV FLEAVEPTRPDDASWVTHWANMTFSTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29158; Mature: 29158
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRS CCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCHHHHHHCCCCCCCCCHHHCCCE FALSVVLNDGEVYRADGRLGDIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEH EEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC KDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGADGRVGMRAELVALVNPYTDS CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHH IAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV HCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH FLEAVEPTRPDDASWVTHWANMTFSTAP HEEECCCCCCCCCHHHHHHHCCEEECCC >Mature Secondary Structure MKPVYLALTIAALAVTDKATAHEFWIDPVDFTVAVGETLEADLRVGQDFSGSPQSFLPRS CCCEEEEEEEEHHHHCCCCCCCEEECCCCCEEEEECCCHHHHHHCCCCCCCCCHHHCCCE FALSVVLNDGEVYRADGRLGDIPALSQDGLADGLAIIVHQTNSTELVWSEWERFLNFAEH EEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC KDLGDVTAMHEARNLSQENVTEDYIRYAKSLVAIGSGAGADGRVGMRAELVALVNPYTDS CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCCHHH IAGGMPMQLWYDDALQPDYQVELFAQSASGAVTVTYHRTNVDGVVVLPIQPGMTYMADAV HCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEEEECCCHHHHHHHH FLEAVEPTRPDDASWVTHWANMTFSTAP HEEECCCCCCCCCHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA