Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89052607

Identifier: 89052607

GI number: 89052607

Start: 106435

End: 106848

Strand: Reverse

Name: 89052607

Synonym: Jann_0116

Alternate gene names: NA

Gene position: 106848-106435 (Counterclockwise)

Preceding gene: 89052608

Following gene: 89052605

Centisome position: 2.47

GC content: 64.25

Gene sequence:

>414_bases
ATGACCCGCCTGATTGCCCTGCCTCTTCTTGCCCTCGCCCTGCCCGCGCAGGCTGAGCTGCCGCCTTGCGTGAGTGATGA
TCTGATGCGCCAGGCATCTCTGGTGGTGCAGATCACCGACCCGTCGGTCGAGACCTTTGCCAACAACATCTGCCGGATCA
GCGGCACGATAGTGCAGGTGCATCGCGGGGCGGCGAATGTCGGGCAAAGCCTGACGGCGACGTTTGATTGCCTGATCGAC
CCGTCTCAGGCCGTCATCGGCGGCACCGTTTACAGTGACCCCGATGCGCTGGCCCGTGCCGGTGCGGTGGAGGTTCACAT
CGGCTCTGACGGCTACGTTGCCGCCAATGGCGCGGGCCTGATCGCGCTGAATGCCCCCACACAACGCATCGCGTGGGAGC
CGTATTGTAGCTAG

Upstream 100 bases:

>100_bases
GGCTGTGTACGCGTTCGCGCAGGAGGCCTGAGGGCTGGAATCCCACCATCGACGGAGGTGCGGACCCTGGTCATTCTGGG
ATGACCGGAAGGAGATCCCC

Downstream 100 bases:

>100_bases
GACTTAGGCCGCTTTGGACCGGCGAGGCCGACGGGGTTTTCGCGGCTGGCCGTTGCCACCGCCACCACCGCCTTTGCCCT
GGGGCTTACGGTTGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTRLIALPLLALALPAQAELPPCVSDDLMRQASLVVQITDPSVETFANNICRISGTIVQVHRGAANVGQSLTATFDCLID
PSQAVIGGTVYSDPDALARAGAVEVHIGSDGYVAANGAGLIALNAPTQRIAWEPYCS

Sequences:

>Translated_137_residues
MTRLIALPLLALALPAQAELPPCVSDDLMRQASLVVQITDPSVETFANNICRISGTIVQVHRGAANVGQSLTATFDCLID
PSQAVIGGTVYSDPDALARAGAVEVHIGSDGYVAANGAGLIALNAPTQRIAWEPYCS
>Mature_136_residues
TRLIALPLLALALPAQAELPPCVSDDLMRQASLVVQITDPSVETFANNICRISGTIVQVHRGAANVGQSLTATFDCLIDP
SQAVIGGTVYSDPDALARAGAVEVHIGSDGYVAANGAGLIALNAPTQRIAWEPYCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14214; Mature: 14083

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLIALPLLALALPAQAELPPCVSDDLMRQASLVVQITDPSVETFANNICRISGTIVQV
CCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHCCEEEECCEEEEE
HRGAANVGQSLTATFDCLIDPSQAVIGGTVYSDPDALARAGAVEVHIGSDGYVAANGAGL
ECCCHHCCCCCEEEEEEEECCCCCEECCEEECCCHHHHHCCEEEEEECCCCEEEECCCEE
IALNAPTQRIAWEPYCS
EEECCCCCCEECCCCCC
>Mature Secondary Structure 
TRLIALPLLALALPAQAELPPCVSDDLMRQASLVVQITDPSVETFANNICRISGTIVQV
CHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEECCCCHHHHHCCEEEECCEEEEE
HRGAANVGQSLTATFDCLIDPSQAVIGGTVYSDPDALARAGAVEVHIGSDGYVAANGAGL
ECCCHHCCCCCEEEEEEEECCCCCEECCEEECCCHHHHHCCEEEEEECCCCEEEECCCEE
IALNAPTQRIAWEPYCS
EEECCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA