| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is 89052594
Identifier: 89052594
GI number: 89052594
Start: 94384
End: 95217
Strand: Direct
Name: 89052594
Synonym: Jann_0103
Alternate gene names: NA
Gene position: 94384-95217 (Clockwise)
Preceding gene: 89052593
Following gene: 89052595
Centisome position: 2.19
GC content: 54.92
Gene sequence:
>834_bases ATGAATATCCAGACGTTCATGCTGCCTTCCCAGAAGGTTAGCCCCGAACTGGAAATCCTGCACGCTGACCTTCAGACCGA GGGTCAACATCCACCAATTCTATTTCTGCACGGCTACACCTCCGGCGCATGGCAATTCGCACAGCATTGGATGCCGACCT TGCAGGCGAACGGATGGCAAAGCTTTGCCCTGAACCTGCGTGGGCATGGTGGAAGTGCTGGACGCGAAACGGTGACGACA GCGCGATTTCTGGACTACGCAGACGATGTTGCACGCGCCATCGCGTATGTGCGCGGACAGACTGACCAGACACCTATATT GATCGGACATTCCCTCGGATCAGTACTGGCGCGTCACTACGCTGCTGAACACTCTGTTCCGGGGCTCGGCCTGTTGATCA CTATTGGCATGCAAGGGTTCATGGGCTGGATGATGAAGCGTTATCCGCTTCAAGGCATGGCCGGGATGATGACGGGTCGA CCGTCAGCCATGTTTGCGAAGTTCGGACCTCAGTATGATGTGATGTATGCGGGTCATAATAAGGAGACTGTGCGCGGCAA TGTCGAACGCCTCATGGCGCAGCCGGACTCTGACAAGGTCTTCATGGACTTGTCCAAATTGAAACTAGGCCTGCCTGCCA AGAGTACGCCCACATTTGTGATGGCGGGAACACGGGATCCAATTGCTTCAGTGGAATCTGTTGAAGCCTTGGGGCGCAGT TACGCGGTCGAGCCGGTGATGTTGCAGGACAAGGCGCATGATATCGTGGCAGGTCCTGATTGGAACGATGGTTTGCAGCA CTTGCAGGCTTGGCTCGAAACAGCAAAATTTTGA
Upstream 100 bases:
>100_bases CGGATATGGTTCTTGGTCCGGCTTCCGCCGACCATTTTGCGGGCATGGTGCAGGGTATGTATGAGGGCGGCCTCGCCTCG CTCGAAGCGCATCACACGAC
Downstream 100 bases:
>100_bases GCAAAACCGGGGCGGGCTATCGGTGAGAATGATCTATATTAAATCTACTAAAACAGACATCGGTTCAATCGTGACGACAG CGCACTTAGTCCCGCATAGC
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase; Acetone-Cyanohydrin Lyase; Alpha/Beta Hydrolase Fold-Containing Protein; Alpha/Beta Hydrolase Fold-Domain Containing Protein
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MNIQTFMLPSQKVSPELEILHADLQTEGQHPPILFLHGYTSGAWQFAQHWMPTLQANGWQSFALNLRGHGGSAGRETVTT ARFLDYADDVARAIAYVRGQTDQTPILIGHSLGSVLARHYAAEHSVPGLGLLITIGMQGFMGWMMKRYPLQGMAGMMTGR PSAMFAKFGPQYDVMYAGHNKETVRGNVERLMAQPDSDKVFMDLSKLKLGLPAKSTPTFVMAGTRDPIASVESVEALGRS YAVEPVMLQDKAHDIVAGPDWNDGLQHLQAWLETAKF
Sequences:
>Translated_277_residues MNIQTFMLPSQKVSPELEILHADLQTEGQHPPILFLHGYTSGAWQFAQHWMPTLQANGWQSFALNLRGHGGSAGRETVTT ARFLDYADDVARAIAYVRGQTDQTPILIGHSLGSVLARHYAAEHSVPGLGLLITIGMQGFMGWMMKRYPLQGMAGMMTGR PSAMFAKFGPQYDVMYAGHNKETVRGNVERLMAQPDSDKVFMDLSKLKLGLPAKSTPTFVMAGTRDPIASVESVEALGRS YAVEPVMLQDKAHDIVAGPDWNDGLQHLQAWLETAKF >Mature_277_residues MNIQTFMLPSQKVSPELEILHADLQTEGQHPPILFLHGYTSGAWQFAQHWMPTLQANGWQSFALNLRGHGGSAGRETVTT ARFLDYADDVARAIAYVRGQTDQTPILIGHSLGSVLARHYAAEHSVPGLGLLITIGMQGFMGWMMKRYPLQGMAGMMTGR PSAMFAKFGPQYDVMYAGHNKETVRGNVERLMAQPDSDKVFMDLSKLKLGLPAKSTPTFVMAGTRDPIASVESVEALGRS YAVEPVMLQDKAHDIVAGPDWNDGLQHLQAWLETAKF
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30499; Mature: 30499
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQTFMLPSQKVSPELEILHADLQTEGQHPPILFLHGYTSGAWQFAQHWMPTLQANGWQ CCCEEEECCCCCCCCCEEEEEECHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCE SFALNLRGHGGSAGRETVTTARFLDYADDVARAIAYVRGQTDQTPILIGHSLGSVLARHY EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHH AAEHSVPGLGLLITIGMQGFMGWMMKRYPLQGMAGMMTGRPSAMFAKFGPQYDVMYAGHN HHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHCCCCEEEEEECCC KETVRGNVERLMAQPDSDKVFMDLSKLKLGLPAKSTPTFVMAGTRDPIASVESVEALGRS CHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH YAVEPVMLQDKAHDIVAGPDWNDGLQHLQAWLETAKF HCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNIQTFMLPSQKVSPELEILHADLQTEGQHPPILFLHGYTSGAWQFAQHWMPTLQANGWQ CCCEEEECCCCCCCCCEEEEEECHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCE SFALNLRGHGGSAGRETVTTARFLDYADDVARAIAYVRGQTDQTPILIGHSLGSVLARHY EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHH AAEHSVPGLGLLITIGMQGFMGWMMKRYPLQGMAGMMTGRPSAMFAKFGPQYDVMYAGHN HHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHCCCCEEEEEECCC KETVRGNVERLMAQPDSDKVFMDLSKLKLGLPAKSTPTFVMAGTRDPIASVESVEALGRS CHHHHHHHHHHHCCCCCCCEEEEHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH YAVEPVMLQDKAHDIVAGPDWNDGLQHLQAWLETAKF HCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA