| Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
|---|---|
| Accession | NC_007802 |
| Length | 4,317,977 |
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The map label for this gene is phoB [H]
Identifier: 89052562
GI number: 89052562
Start: 65165
End: 66445
Strand: Direct
Name: phoB [H]
Synonym: Jann_0071
Alternate gene names: 89052562
Gene position: 65165-66445 (Clockwise)
Preceding gene: 89052560
Following gene: 89052564
Centisome position: 1.51
GC content: 61.83
Gene sequence:
>1281_bases ATGGGGGCATCACTTCCCAAAGTAGCGGCGGGTCGCCCCGCGGCCGTGGACCCGGAGCCAGACGCGCTGACCGTGTTGGT GTTGGATGACAGCCCCGCGCAGCGCAACATGGTGTGCGCGCTACTGCGCCGTTGGGGGCATACGGCCATATCAACCGGCG ATCCGGTGGAAGCGCTGGCCCGCGCGCGGGAACCGGACATCTCCTTGATTCTGTGCGACTGGATGATGCCGGAGATGACG GGGCCGGAGTTCTGTCATCGCCTGAGGTCGGAGGTGACGGACACCTATCCTTATGTTTTGCTGCTCACCTCCAACACCGA CCGGGGGGCCGTAGCCGAAGGGCTCGCGGCCGGCGCGGATGACTTCCTCAACAAACCCGTGCGTCCGCCAGAGTTGCAGG CCCGCATGAATGCCGGCGCGCGCATCGTTGCCATGCAGCAGGAACTGCGCGCCAAGAACGGGTTGCTGGAAACGACGCTG GACGAGTTGCAGTTGCTCTACGATGCCATTGACCGTGACCTTGATGAGGCGCGGCGCCTGCAAATGGCGTCCTTGCAAGA CACTCACCGTCCGTTCAAAGGCGGTGACGTATCGTTGCTGTTGGAGGCCAGCGGTCATGTCGGCGGCGACATGGTGGGAT ATTTCAACGTGACCGACGACACGATTGGCCTGTTCAGTCTGGATGTGTCGGGGCACGGGGTTGCGTCGGCCATGTTGGCC GCGCGTACAGCCGGGATGCTGTCAGAGGCCTCGCCCGACCAGAACATCGCGATGGAACGGGGCCCGGATGGGCAGTTCTT TGACCTCCCGCCCGATATCGCCGTTGGCCGTATGAACGATCTGCTGCTGAAAGAGGTTCAGACGGATCGCTATTTCACCA TCTGCATCGCGTTTGCTAACCTGAAGACTGGCCTCTTGCGGATCGTGCAGGCTGGCCATCCACACCCGATGGTTCTGCGC GCGACCGGCCAGGTCGACATGGTCGGCGACGGTGGCCCACCCGTGGGTTTGCTGCCCAATATGCCCTTCACTTCGTTTGA GCTTCAATTGAACCCCGGCGACAGGGTGCTGATGTACTCCGATGGCCTGACGGAATGCCCCAACGTCCAAGGTGACATGC TGGACGACGACGGCCTGATCGACTTGATGAAAAAGAACAAATCCGAAGAAAACGTGGCGTTTCTGTCGGCACTGCGGGAC GGTTTGGTGGATTTCGCAGGCACGACGGATTTTCCCGACGACCTCTCAGCCCTGCTGTTCTCCTTCCGCGGGGCCCCATA A
Upstream 100 bases:
>100_bases AACAAAGTGATGTCTTGCGGCCGATAACGTTTCAAATTTTCCAGTTCATGGCCCATTAAAGAATTCGGCCCATGGTCCTT GGAAATAGCTGAGGACAAGC
Downstream 100 bases:
>100_bases GGCGACGGGCGAAGGTCGGAGCCGCCTTGCCCCCTACGCTCCCGCCAGATATCGCGCGACGAAATGGCGATCACCCGCAA CGGCCAGCTTGTCCAAAGCC
Product: response regulator receiver (CheY-like) modulated serine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MGASLPKVAAGRPAAVDPEPDALTVLVLDDSPAQRNMVCALLRRWGHTAISTGDPVEALARAREPDISLILCDWMMPEMT GPEFCHRLRSEVTDTYPYVLLLTSNTDRGAVAEGLAAGADDFLNKPVRPPELQARMNAGARIVAMQQELRAKNGLLETTL DELQLLYDAIDRDLDEARRLQMASLQDTHRPFKGGDVSLLLEASGHVGGDMVGYFNVTDDTIGLFSLDVSGHGVASAMLA ARTAGMLSEASPDQNIAMERGPDGQFFDLPPDIAVGRMNDLLLKEVQTDRYFTICIAFANLKTGLLRIVQAGHPHPMVLR ATGQVDMVGDGGPPVGLLPNMPFTSFELQLNPGDRVLMYSDGLTECPNVQGDMLDDDGLIDLMKKNKSEENVAFLSALRD GLVDFAGTTDFPDDLSALLFSFRGAP
Sequences:
>Translated_426_residues MGASLPKVAAGRPAAVDPEPDALTVLVLDDSPAQRNMVCALLRRWGHTAISTGDPVEALARAREPDISLILCDWMMPEMT GPEFCHRLRSEVTDTYPYVLLLTSNTDRGAVAEGLAAGADDFLNKPVRPPELQARMNAGARIVAMQQELRAKNGLLETTL DELQLLYDAIDRDLDEARRLQMASLQDTHRPFKGGDVSLLLEASGHVGGDMVGYFNVTDDTIGLFSLDVSGHGVASAMLA ARTAGMLSEASPDQNIAMERGPDGQFFDLPPDIAVGRMNDLLLKEVQTDRYFTICIAFANLKTGLLRIVQAGHPHPMVLR ATGQVDMVGDGGPPVGLLPNMPFTSFELQLNPGDRVLMYSDGLTECPNVQGDMLDDDGLIDLMKKNKSEENVAFLSALRD GLVDFAGTTDFPDDLSALLFSFRGAP >Mature_425_residues GASLPKVAAGRPAAVDPEPDALTVLVLDDSPAQRNMVCALLRRWGHTAISTGDPVEALARAREPDISLILCDWMMPEMTG PEFCHRLRSEVTDTYPYVLLLTSNTDRGAVAEGLAAGADDFLNKPVRPPELQARMNAGARIVAMQQELRAKNGLLETTLD ELQLLYDAIDRDLDEARRLQMASLQDTHRPFKGGDVSLLLEASGHVGGDMVGYFNVTDDTIGLFSLDVSGHGVASAMLAA RTAGMLSEASPDQNIAMERGPDGQFFDLPPDIAVGRMNDLLLKEVQTDRYFTICIAFANLKTGLLRIVQAGHPHPMVLRA TGQVDMVGDGGPPVGLLPNMPFTSFELQLNPGDRVLMYSDGLTECPNVQGDMLDDDGLIDLMKKNKSEENVAFLSALRDG LVDFAGTTDFPDDLSALLFSFRGAP
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=123, Percent_Identity=34.9593495934959, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 46038; Mature: 45907
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGASLPKVAAGRPAAVDPEPDALTVLVLDDSPAQRNMVCALLRRWGHTAISTGDPVEALA CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH RAREPDISLILCDWMMPEMTGPEFCHRLRSEVTDTYPYVLLLTSNTDRGAVAEGLAAGAD HCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCH DFLNKPVRPPELQARMNAGARIVAMQQELRAKNGLLETTLDELQLLYDAIDRDLDEARRL HHHCCCCCCHHHHHHHCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH QMASLQDTHRPFKGGDVSLLLEASGHVGGDMVGYFNVTDDTIGLFSLDVSGHGVASAMLA HHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH ARTAGMLSEASPDQNIAMERGPDGQFFDLPPDIAVGRMNDLLLKEVQTDRYFTICIAFAN HHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCHHCCHHHHHHHHHCCCCEEEEEEEHHH LKTGLLRIVQAGHPHPMVLRATGQVDMVGDGGPPVGLLPNMPFTSFELQLNPGDRVLMYS HHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC DGLTECPNVQGDMLDDDGLIDLMKKNKSEENVAFLSALRDGLVDFAGTTDFPDDLSALLF CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SFRGAP HHCCCC >Mature Secondary Structure GASLPKVAAGRPAAVDPEPDALTVLVLDDSPAQRNMVCALLRRWGHTAISTGDPVEALA CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHH RAREPDISLILCDWMMPEMTGPEFCHRLRSEVTDTYPYVLLLTSNTDRGAVAEGLAAGAD HCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHCCCH DFLNKPVRPPELQARMNAGARIVAMQQELRAKNGLLETTLDELQLLYDAIDRDLDEARRL HHHCCCCCCHHHHHHHCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHH QMASLQDTHRPFKGGDVSLLLEASGHVGGDMVGYFNVTDDTIGLFSLDVSGHGVASAMLA HHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHH ARTAGMLSEASPDQNIAMERGPDGQFFDLPPDIAVGRMNDLLLKEVQTDRYFTICIAFAN HHHHHHHHCCCCCCCEEEECCCCCCEECCCCCCHHCCHHHHHHHHHCCCCEEEEEEEHHH LKTGLLRIVQAGHPHPMVLRATGQVDMVGDGGPPVGLLPNMPFTSFELQLNPGDRVLMYS HHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEC DGLTECPNVQGDMLDDDGLIDLMKKNKSEENVAFLSALRDGLVDFAGTTDFPDDLSALLF CCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SFRGAP HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]