Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

Click here to switch to the map view.

The map label for this gene is 88658432

Identifier: 88658432

GI number: 88658432

Start: 328298

End: 328471

Strand: Direct

Name: 88658432

Synonym: ECH_0338

Alternate gene names: NA

Gene position: 328298-328471 (Clockwise)

Preceding gene: 88657809

Following gene: 88657684

Centisome position: 27.91

GC content: 20.11

Gene sequence:

>174_bases
ATGTTTGATAAATTAATGATAATTGTAATAAATTTTTATTATATGTTTAAAATTTATAGATTAAAAATAACGAATTTTAT
ATATTGGTTGTTGATCATTAATGTGTATAGTAGTATTATTAAGTGTACTTATATAGAGTACACTGTGTTTTGTGGTGTTT
CATCAGTATTGTAG

Upstream 100 bases:

>100_bases
TAGAATAATTTATTAACGATTAGTTATAATGTATTTATAAAATTGATAATAAATTATATATTGCTATGTTTGTTTATCCG
TTTGGATGTATAGGAATCCT

Downstream 100 bases:

>100_bases
GTAATTATGGCACAGAATTTTGAAATGTCCAAAGAAAGATTGTATATTTCTGAAGTATTGGTTGTTGATGATGAAGTTGA
TATTAGGAATTTAATAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MFDKLMIIVINFYYMFKIYRLKITNFIYWLLIINVYSSIIKCTYIEYTVFCGVSSVL

Sequences:

>Translated_57_residues
MFDKLMIIVINFYYMFKIYRLKITNFIYWLLIINVYSSIIKCTYIEYTVFCGVSSVL
>Mature_57_residues
MFDKLMIIVINFYYMFKIYRLKITNFIYWLLIINVYSSIIKCTYIEYTVFCGVSSVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6953; Mature: 6953

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKLMIIVINFYYMFKIYRLKITNFIYWLLIINVYSSIIKCTYIEYTVFCGVSSVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDKLMIIVINFYYMFKIYRLKITNFIYWLLIINVYSSIIKCTYIEYTVFCGVSSVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA