Definition Ehrlichia chaffeensis str. Arkansas, complete genome.
Accession NC_007799
Length 1,176,248

Click here to switch to the map view.

The map label for this gene is 88658034

Identifier: 88658034

GI number: 88658034

Start: 1174464

End: 1174871

Strand: Direct

Name: 88658034

Synonym: ECH_1154

Alternate gene names: NA

Gene position: 1174464-1174871 (Clockwise)

Preceding gene: 88658575

Following gene: 88658303

Centisome position: 99.85

GC content: 27.94

Gene sequence:

>408_bases
ATGTCCTACTGGCTTTTAAAAACAGAACCCCAAGATTTTTCATGGGATGATATGGTGCGTGATAATGTTACTGTATGGGA
TAATGTGTTAAACTATCAAGCTCAAAATTATCTAAAAACAATGAAATATAATGATCTTGCATTTTTTTATCACTCTGGAA
AAGAAAAAGGAATAATAGGAATTGTATCCATAGATAAAGAATTTTATTTGCCCAATACAAATAATAAATTTGGTGTTGTT
GAAGTTAAAACACATATAAAACTAAATAAGACTGTCTTTTTGAAAGACATAAAATCAAATCCAACATTAAAAACTATGTT
AATTCTAAAACAACCACGTCTTTCAGTTTCTCAAGTAACAGAACAAGAATGGAATTGTATTTTACATTTAGGTGAGACTA
TCTTATGA

Upstream 100 bases:

>100_bases
AATTCCCGAATCAGCTTATAAAATGCAATTTAATAAGAATGAATATTGGGATGAGGAATCATTTAATATACCAACTTTTT
TAAGAAAAAAATAAGGTATA

Downstream 100 bases:

>100_bases
TTGAAATCAATATTTACTATAGGAAGTGGTATAATATAATAAATAAGCCAAAAAGTTTTATAAAAAAAATTATTAATACT
TCTCTAATAGATTTAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIGIVSIDKEFYLPNTNNKFGVV
EVKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVTEQEWNCILHLGETIL

Sequences:

>Translated_135_residues
MSYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIGIVSIDKEFYLPNTNNKFGVV
EVKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVTEQEWNCILHLGETIL
>Mature_134_residues
SYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIGIVSIDKEFYLPNTNNKFGVVE
VKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVTEQEWNCILHLGETIL

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=167, Percent_Identity=32.9341317365269, Blast_Score=81, Evalue=2e-16,
Organism=Homo sapiens, GI40806221, Length=167, Percent_Identity=32.9341317365269, Blast_Score=81, Evalue=2e-16,
Organism=Homo sapiens, GI7661804, Length=167, Percent_Identity=32.9341317365269, Blast_Score=81, Evalue=2e-16,
Organism=Homo sapiens, GI83267859, Length=84, Percent_Identity=44.047619047619, Blast_Score=69, Evalue=1e-12,
Organism=Homo sapiens, GI40806219, Length=84, Percent_Identity=44.047619047619, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15863; Mature: 15731

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIG
CCEEEEEECCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE
IVSIDKEFYLPNTNNKFGVVEVKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVT
EEEECCEEECCCCCCEEEEEEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCHHHHH
EQEWNCILHLGETIL
HHCCEEEEEECCCCC
>Mature Secondary Structure 
SYWLLKTEPQDFSWDDMVRDNVTVWDNVLNYQAQNYLKTMKYNDLAFFYHSGKEKGIIG
CEEEEEECCCCCCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE
IVSIDKEFYLPNTNNKFGVVEVKTHIKLNKTVFLKDIKSNPTLKTMLILKQPRLSVSQVT
EEEECCEEECCCCCCEEEEEEEEEEEEECCEEEEEECCCCCCEEEEEEEECCCCCHHHHH
EQEWNCILHLGETIL
HHCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA