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The map label for this gene is 88657868

Identifier: 88657868

GI number: 88657868

Start: 65718

End: 66503

Strand: Direct

Name: 88657868

Synonym: ECH_0074

Alternate gene names: NA

Gene position: 65718-66503 (Clockwise)

Preceding gene: 88658603

Following gene: 88657919

Centisome position: 5.59

GC content: 33.72

Gene sequence:

>786_bases
GTGAGTGACTTGGACCTATTGGAAGTGTTGAAATTTTATCATGAGAATGGTATTGATTGTACATTAGAAGATGTGCAGTA
TAATGTTTTTACAAGTAAAAATCTATCTTTGCAAAATAGTAGTGATACAGGGTATTGTATGAAAGAAAAACAGGCAAGTA
TTAAAGAAAATACGGAGGATTATTATCTGTTAAAAGCTCAAAGTCTTGCTGAACAATGTAATACTATAGAGCAATTAAAA
AGTGCTGTAGAATCTTTTGATGGATGTGATATAAAAAATTTAGCAACAAATACTGTATTTGCTGATGGGAATCCTAAAGC
AAGAGTCATGTTAATAGGAGAAGCTCCTGGTGCGAATGAAGATTTAAAAGGTATACCGTTTTGTGGTGCTAGTGGTATGT
TGCTTGATAAAATGTTGCAGGCAATAGGTTTTGATAGAACTACTGTATATATTAGTAATGCTGTATTTTGGCGTCCTCCT
GGTAATAGAAGACCAACAGATTTTGAAATAGCAGTATGCAAGCCTTTCGTAGAAAAACATATAGCCTTAATTGTGCCTCA
AATGTTAGTATTAGTGGGAAGTACTGCGTGTTATGCTATGCTTGATTCTAAGAACCCTATATCTAGACTTAGAGGGAGGT
TTCATTCATATAGTAATCAGTTTCTTCAGCATAGTATTACTACGGGTATTATATTTCATCCATCATACTTATTACGCCAA
CCAATGCAAAAACGTCTTGCTTGGGAGGATTTAAAGCAGATTAAGCGTTATTTTGATACTTTGTAA

Upstream 100 bases:

>100_bases
CGGTATTTTTAAAATATCTATCTAAATTTAAACGTGATTTTGCAATAGAAAAAGTGAAAAAGAAAGAACGAACTGATCTT
ATATAATTGTTGGTATTGAT

Downstream 100 bases:

>100_bases
TATTATTCTAGCATGTAAATGTAAGTTTAAGAATGAATATTGCTTTGAGATGTGTTCACGGGTGTTTGATTTGTGTTGTA
TAAATAGCTCTGTAAACCAG

Product: uracil-DNA glycosylase

Products: NA

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Glycosylase; DNA Polymerase Bacteriophage-Type; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTEDYYLLKAQSLAEQCNTIEQLK
SAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANEDLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPP
GNRRPTDFEIAVCKPFVEKHIALIVPQMLVLVGSTACYAMLDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQ
PMQKRLAWEDLKQIKRYFDTL

Sequences:

>Translated_261_residues
MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTEDYYLLKAQSLAEQCNTIEQLK
SAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANEDLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPP
GNRRPTDFEIAVCKPFVEKHIALIVPQMLVLVGSTACYAMLDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQ
PMQKRLAWEDLKQIKRYFDTL
>Mature_260_residues
SDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTEDYYLLKAQSLAEQCNTIEQLKS
AVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANEDLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPPG
NRRPTDFEIAVCKPFVEKHIALIVPQMLVLVGSTACYAMLDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQP
MQKRLAWEDLKQIKRYFDTL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29528; Mature: 29397

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTED
CCCHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCC
YYLLKAQSLAEQCNTIEQLKSAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCEEEEEEECCCCCCC
DLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECEEEECCCCCCCCCCEEEEEHHHHHHHH
IALIVPQMLVLVGSTACYAMLDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQ
HHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHH
PMQKRLAWEDLKQIKRYFDTL
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLDLLEVLKFYHENGIDCTLEDVQYNVFTSKNLSLQNSSDTGYCMKEKQASIKENTED
CCHHHHHHHHHHHCCCCCEEEECEEEEEEECCCCEEECCCCCCCCHHHHHHHHHCCCCC
YYLLKAQSLAEQCNTIEQLKSAVESFDGCDIKNLATNTVFADGNPKARVMLIGEAPGANE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCEEEEEEECCCCCCC
DLKGIPFCGASGMLLDKMLQAIGFDRTTVYISNAVFWRPPGNRRPTDFEIAVCKPFVEKH
CCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECEEEECCCCCCCCCCEEEEEHHHHHHHH
IALIVPQMLVLVGSTACYAMLDSKNPISRLRGRFHSYSNQFLQHSITTGIIFHPSYLLRQ
HHHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHHHH
PMQKRLAWEDLKQIKRYFDTL
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA