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The map label for this gene is spo0J [H]

Identifier: 88657847

GI number: 88657847

Start: 2

End: 847

Strand: Direct

Name: spo0J [H]

Synonym: ECH_0001

Alternate gene names: 88657847

Gene position: 2-847 (Clockwise)

Preceding gene: NA

Following gene: 88658505

Centisome position: 0.0

GC content: 28.72

Gene sequence:

>846_bases
ATGACAAAAAGACTAGGAAAAGGCATTTTTGAGTTAATAGGGAATAGCACATTAGAAATTAACAACAACATCAGTACTGA
TACCCACCTTACAATGCCGATAAATTTATTAAACCCTAGTACATCACAACCAAGAAAAACTTTTAATCAAGAATGTCTTA
AGGAACTGGCAGAATCTATTTCCAAACACGGCATAATACAACCAATAATCATCAGAAAAAATCCACATAAAAAAGGATAT
GAAATAATAGCAGGAGAAAGAAGATGGAGAGCTAGCATACTAGCAAAATTAAAATCAGTACCTGTAATTGTAAAAGAAAT
AAGTGATAGTCAGTGTTTAGAATTATCAATCATAGAAAACATACAAAGACAAGATCTAACACCTATAGAGGAAGCTGAAG
CATACTCTAACCTCATCAATACTTTTTCTTATACACATGAAGATTTAGCTTCCATTATAGGTAAAAGCCGTAGTCATATC
ACAAATATGATAAGAATATTATCTTTACCAACTTCTATAAAGTCTATGATAAACGATAAACTTATATCATTTGGACATGC
CAGAGCTTTAATAAATATTGAAAATCCAGAAGCAATAGCAGAAAAAATTATTTCTTTAAATTTAAACGTAAGACAAACTG
AACTATTAATTAAAAATTTACAAAAACCACATAAGAAAAAATCCAAAGAAAACTTAACAGAACTAGAGCAATCACTATCT
GAAATATTAAATTTACAAATTAAAATAAACGGTTTAAAAAACAAAGGCAGTATTGTGATAAAATATAACAATACACAACA
ACTTAACTCAATACTAGAGAAGCTCAAGAAAGTAACTCAAACATAG

Upstream 100 bases:

>100_bases
ACCTGCTATTATTTATGATTTTAAATGTGCAGGTTCTCAAGCATATATATATCTAGCAAAGGAAATACTAAGAAAACAAA
AAAAATATTAGGTATTCAAA

Downstream 100 bases:

>100_bases
ACTTTCAATATAACACCAAAGATATGTAACTTTCGAATACAATTACTGTTTTTTTTTTACGCAAAAGTAATTCTTAAAAA
TCACTATATATAAAATTGTA

Product: ParB family chromosome partitioning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESISKHGIIQPIIIRKNPHKKGY
EIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHI
TNMIRILSLPTSIKSMINDKLISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLS
EILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT

Sequences:

>Translated_281_residues
MTKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESISKHGIIQPIIIRKNPHKKGY
EIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHI
TNMIRILSLPTSIKSMINDKLISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLS
EILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT
>Mature_280_residues
TKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESISKHGIIQPIIIRKNPHKKGYE
IIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIENIQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHIT
NMIRILSLPTSIKSMINDKLISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLSE
ILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT

Specific function: Required for the initiation of sporulation and for normal chromosome segregation. Antagonizes sporulation inhibition of soj. It probably interacts with a specific DNA site and other proteins involved in partitioning and cell division, and antagonizes soj

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31782; Mature: 31651

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESI
CCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIEN
HHCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHCCCCHHEEHHHHHH
IQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHITNMIRILSLPTSIKSMINDK
HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
LISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLS
HHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
EILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT
HHHEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKRLGKGIFELIGNSTLEINNNISTDTHLTMPINLLNPSTSQPRKTFNQECLKELAESI
CCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
SKHGIIQPIIIRKNPHKKGYEIIAGERRWRASILAKLKSVPVIVKEISDSQCLELSIIEN
HHCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCHHHHHCCCCHHEEHHHHHH
IQRQDLTPIEEAEAYSNLINTFSYTHEDLASIIGKSRSHITNMIRILSLPTSIKSMINDK
HHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHH
LISFGHARALINIENPEAIAEKIISLNLNVRQTELLIKNLQKPHKKKSKENLTELEQSLS
HHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
EILNLQIKINGLKNKGSIVIKYNNTQQLNSILEKLKKVTQT
HHHEEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 1552862; 9384377; 1900505; 8071208 [H]