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The map label for this gene is 88657580

Identifier: 88657580

GI number: 88657580

Start: 129374

End: 130210

Strand: Direct

Name: 88657580

Synonym: ECH_0138

Alternate gene names: NA

Gene position: 129374-130210 (Clockwise)

Preceding gene: 88657620

Following gene: 88658012

Centisome position: 11.0

GC content: 28.55

Gene sequence:

>837_bases
ATGAGCAAGTTTATAATTTTGCCTGATAGAAGTATTATAGTCTTCTATGGACAAGATGTTAAGCAATTACTTAATCAAAC
TACAACGAATAATGTTTTAAATTTAAGTCAAAATAAAGCTATTTATTCTTTGCTTTTGAGTCCTAGTGGTAGATATATTT
ATGACTTCTTTATTGTGCAATATGGTAAATATGTATTGTTAGATTGCTGTAGTACAGAAAAAGAGGAAATTATACAAAAG
TTTTTGTCGTATAAATTACAATTAAAAATAGTAATTAAGGAAAAAAAACACTATAAAGTTGGTGTGTTTATTGGGGATCA
GTATGATAGGAATGAGTGTGGATATACTTATTGTCAAGGTGATACTATATTCTTTCAAGATCCTAGGTTATCTAAATTAG
GTTTACGTGTTATGTTTAATGAATCCCAAAAAGTATTTAGTAACATAGAATATGATGTTGGAAAATATGAAGATTATGAA
ATATTGAGAATTAATAATACTGTTCCAGATTGTAGAAAAGATATGATAAAAGGAACCTCATTTCCTTTGCAGTTCAGGAT
GGCACAATTCCATGCGATTGATTTCAATAAAGGTTGTTATATAGGGCAAGAAACTGTAGCACGTATGTATCGTGCTGGAG
TGAAGAAAAATATATATACTATAATTTCTGAACATCAGTCTTTTTGTGATACGAAAGTTATGTGTGCTCAGCAGGAAATA
GGTAGATTATTGTCTAATGTTGGTAATATAGGATTATGTTTGTTGGATATTAGTTCAGAGCATGATTTTTGCAATTTAAA
AATTGGTGGTGCTAAAGTTAAAATACTACTTAATTAA

Upstream 100 bases:

>100_bases
CAAATTGATAATGTGTATTTATTGTGGAATAACAATTGCATGATCACTTTTTATAGGCAGAATTAGGTTGACATTCTAAG
TAATAAAAGTATGGAGGAGT

Downstream 100 bases:

>100_bases
TATAGGTCTTTATCTAATTTCTTTTTACTTAAGATGTATAACTTTCGAATTATCCTGTTGCAGTGTGAATAACTTTTATT
TTTTAGGCTATTCTATGATT

Product: aminomethyl transferase family protein

Products: NA

Alternate protein names: Glycine Cleavage T-Protein; Aminomethyl Transferase Family Protein; Aminomethyltransferase; Aminomethyltransferase Family Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Glycine Cleavage T-Protein C-Terminal Barrel; Aminomethyltransferase Protein; Aminomethyltransferase Related GcvT; GcvT-Like Aminomethyltransferase Protein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSKFIILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGKYVLLDCCSTEKEEIIQK
FLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTIFFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYE
ILRINNTVPDCRKDMIKGTSFPLQFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSFCDTKVMCAQQEI
GRLLSNVGNIGLCLLDISSEHDFCNLKIGGAKVKILLN

Sequences:

>Translated_278_residues
MSKFIILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGKYVLLDCCSTEKEEIIQK
FLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTIFFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYE
ILRINNTVPDCRKDMIKGTSFPLQFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSFCDTKVMCAQQEI
GRLLSNVGNIGLCLLDISSEHDFCNLKIGGAKVKILLN
>Mature_277_residues
SKFIILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQYGKYVLLDCCSTEKEEIIQKF
LSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQGDTIFFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYEI
LRINNTVPDCRKDMIKGTSFPLQFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSFCDTKVMCAQQEIG
RLLSNVGNIGLCLLDISSEHDFCNLKIGGAKVKILLN

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58197556, Length=272, Percent_Identity=24.2647058823529, Blast_Score=88, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71985951, Length=260, Percent_Identity=26.1538461538462, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24645123, Length=269, Percent_Identity=23.7918215613383, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32118; Mature: 31986

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFIILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQ
CCCEEEECCCCEEEEECHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEEEEEHH
YGKYVLLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQG
CCCEEEEEECCCCHHHHHHHHHCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECC
DTIFFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTS
CEEEEECCCCHHCCEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCC
FPLQFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSFCDTKVMCAQQEI
CCEEEEEEEEEEEECCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
GRLLSNVGNIGLCLLDISSEHDFCNLKIGGAKVKILLN
HHHHHCCCCCEEEEEEECCCCCEEEEEECCEEEEEEEC
>Mature Secondary Structure 
SKFIILPDRSIIVFYGQDVKQLLNQTTTNNVLNLSQNKAIYSLLLSPSGRYIYDFFIVQ
CCEEEECCCCEEEEECHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEEEEEHH
YGKYVLLDCCSTEKEEIIQKFLSYKLQLKIVIKEKKHYKVGVFIGDQYDRNECGYTYCQG
CCCEEEEEECCCCHHHHHHHHHCCEEEEEEEEEECCCEEEEEEECCCCCCCCCCEEEECC
DTIFFQDPRLSKLGLRVMFNESQKVFSNIEYDVGKYEDYEILRINNTVPDCRKDMIKGTS
CEEEEECCCCHHCCEEEEECCCHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCC
FPLQFRMAQFHAIDFNKGCYIGQETVARMYRAGVKKNIYTIISEHQSFCDTKVMCAQQEI
CCEEEEEEEEEEEECCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHH
GRLLSNVGNIGLCLLDISSEHDFCNLKIGGAKVKILLN
HHHHHCCCCCEEEEEEECCCCCEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA