| Definition | Neorickettsia sennetsu str. Miyayama chromosome, complete genome. |
|---|---|
| Accession | NC_007798 |
| Length | 859,006 |
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The map label for this gene is purE
Identifier: 88608847
GI number: 88608847
Start: 200085
End: 200564
Strand: Reverse
Name: purE
Synonym: NSE_0235
Alternate gene names: 88608847
Gene position: 200564-200085 (Counterclockwise)
Preceding gene: 88608749
Following gene: 88608684
Centisome position: 23.35
GC content: 45.83
Gene sequence:
>480_bases ATGGGTTCTGAAAAAGTAGCGATAGTAATGGGCAGTACGTCTGATTATCCTACTATGCAGCATGCGGAGAAAATACTAGA ACAGCTGGTAGTACACTTTGAGACTTATGTGATATCAGCGCACAGAACTCCAGCAAGGTTATATGAGTTTTCAAAAAACG CAGCAGACAAAGGAATTAGGACAATAATAGCAGGTGCTGGAGGAGCAGCTCATTTACCAGGAATGATTGCAGCCATAAGC GATATTCCGGTCCTAGGAGTACCAGTAGAAAGTAAGACGCTCAACGGTTTGGATAGCTTACTTTCAATATGCCAGATGCC TGCAGGCACGCCAGTCGGCACTCTTTCTATAGGAAAGGCCGGCGCAGAAAACGCAGCACTCCTCGCCTGTAGGATACTCG CCCTACAAGATAAGGACCTACAAGACAGACTGCGAATCTGGATCAGAAAACAAACAGAGACTGTACCTGAAAGACCCTAA
Upstream 100 bases:
>100_bases ATTCAATTTCATTCTTGATAATTATCTGTGACCAAACATACGTGCATATTGAGTACTTTTATGGATGAATTAGAATTTTA TATTTGTTACGGTGGTGAGA
Downstream 100 bases:
>100_bases GAGCACTCAACCAAGATGGACGCGACATCTACCTGTGGCACGAGAAAAGGAGAAAATCTACTCCTAGTCGACAGCATTAG TGCTACGATCCTCTCGCTTA
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGSEKVAIVMGSTSDYPTMQHAEKILEQLVVHFETYVISAHRTPARLYEFSKNAADKGIRTIIAGAGGAAHLPGMIAAIS DIPVLGVPVESKTLNGLDSLLSICQMPAGTPVGTLSIGKAGAENAALLACRILALQDKDLQDRLRIWIRKQTETVPERP
Sequences:
>Translated_159_residues MGSEKVAIVMGSTSDYPTMQHAEKILEQLVVHFETYVISAHRTPARLYEFSKNAADKGIRTIIAGAGGAAHLPGMIAAIS DIPVLGVPVESKTLNGLDSLLSICQMPAGTPVGTLSIGKAGAENAALLACRILALQDKDLQDRLRIWIRKQTETVPERP >Mature_158_residues GSEKVAIVMGSTSDYPTMQHAEKILEQLVVHFETYVISAHRTPARLYEFSKNAADKGIRTIIAGAGGAAHLPGMIAAISD IPVLGVPVESKTLNGLDSLLSICQMPAGTPVGTLSIGKAGAENAALLACRILALQDKDLQDRLRIWIRKQTETVPERP
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=155, Percent_Identity=61.2903225806452, Blast_Score=154, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6324702, Length=150, Percent_Identity=50, Blast_Score=148, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16987; Mature: 16856
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSEKVAIVMGSTSDYPTMQHAEKILEQLVVHFETYVISAHRTPARLYEFSKNAADKGIR CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHH TIIAGAGGAAHLPGMIAAISDIPVLGVPVESKTLNGLDSLLSICQMPAGTPVGTLSIGKA EEEECCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCC GAENAALLACRILALQDKDLQDRLRIWIRKQTETVPERP CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GSEKVAIVMGSTSDYPTMQHAEKILEQLVVHFETYVISAHRTPARLYEFSKNAADKGIR CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCHHHHHHH TIIAGAGGAAHLPGMIAAISDIPVLGVPVESKTLNGLDSLLSICQMPAGTPVGTLSIGKA EEEECCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCC GAENAALLACRILALQDKDLQDRLRIWIRKQTETVPERP CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12620739 [H]