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The map label for this gene is 88608056

Identifier: 88608056

GI number: 88608056

Start: 167307

End: 167705

Strand: Reverse

Name: 88608056

Synonym: NSE_0197

Alternate gene names: NA

Gene position: 167705-167307 (Counterclockwise)

Preceding gene: 88608803

Following gene: 88608413

Centisome position: 19.52

GC content: 41.6

Gene sequence:

>399_bases
ATGTTTAACCCATCTAGAAAAAAGTTCGCCACGTGTGTATGTCTTCTGCTCCTTTCCGCATGTGCAGAAAAAACGGCTAT
ACATGGATACCTCGTTGAGAGCCCAATCAAAATCGGAGAACGCAAAGAAGTAGTCAGAGTAATGTCAGGTGATCCTACAC
TGATAGATGGTGAAACGTGGTACTACGTAAGAATAGCTACACACTCTGATACTATTGGGATCAGGAAAAGCTACTCCTCA
AATGTGATGAAAGTTGTTTTCGAGAATGATGTGGTCAGTGACATCCAGAAGATAAATATCCCAAAGGAAAAGGCTCTCAG
AATGCCAGGTGAGAAGTTAATTCAAGAGGAAAGCGATCGATCTACAAAATTGGAAGATGTACTCACTGGTACGTCTTGA

Upstream 100 bases:

>100_bases
TGATACTCAGTGGGGCTTGTTGCATTTCTGGTACGGTCCTTTTCGGTGTGTTTTCTAAAAAAATCTCATGTCTGTTTTGC
TGCTTTTTAATTAACAAATT

Downstream 100 bases:

>100_bases
TTATAACTGTACATTTCCCGATGCCTGGACTGTGGTTCAGGCAATTGAAAGTCCGTGCGATGTGAGTTACAATGTCAGCC
TGTTTTCTTGTACTTGTTCG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MFNPSRKKFATCVCLLLLSACAEKTAIHGYLVESPIKIGERKEVVRVMSGDPTLIDGETWYYVRIATHSDTIGIRKSYSS
NVMKVVFENDVVSDIQKINIPKEKALRMPGEKLIQEESDRSTKLEDVLTGTS

Sequences:

>Translated_132_residues
MFNPSRKKFATCVCLLLLSACAEKTAIHGYLVESPIKIGERKEVVRVMSGDPTLIDGETWYYVRIATHSDTIGIRKSYSS
NVMKVVFENDVVSDIQKINIPKEKALRMPGEKLIQEESDRSTKLEDVLTGTS
>Mature_132_residues
MFNPSRKKFATCVCLLLLSACAEKTAIHGYLVESPIKIGERKEVVRVMSGDPTLIDGETWYYVRIATHSDTIGIRKSYSS
NVMKVVFENDVVSDIQKINIPKEKALRMPGEKLIQEESDRSTKLEDVLTGTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14809; Mature: 14809

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPSRKKFATCVCLLLLSACAEKTAIHGYLVESPIKIGERKEVVRVMSGDPTLIDGETW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCEECCCEE
YYVRIATHSDTIGIRKSYSSNVMKVVFENDVVSDIQKINIPKEKALRMPGEKLIQEESDR
EEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCC
STKLEDVLTGTS
CHHHHHHHCCCC
>Mature Secondary Structure
MFNPSRKKFATCVCLLLLSACAEKTAIHGYLVESPIKIGERKEVVRVMSGDPTLIDGETW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCCCCEECCCEE
YYVRIATHSDTIGIRKSYSSNVMKVVFENDVVSDIQKINIPKEKALRMPGEKLIQEESDR
EEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHCCCHHHHHHCCCCC
STKLEDVLTGTS
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA