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The map label for this gene is ycdH [C]

Identifier: 88608799

GI number: 88608799

Start: 717596

End: 718054

Strand: Direct

Name: ycdH [C]

Synonym: NSE_0807

Alternate gene names: 88608799

Gene position: 717596-718054 (Clockwise)

Preceding gene: 88608698

Following gene: 88608535

Centisome position: 83.54

GC content: 42.27

Gene sequence:

>459_bases
ATGAGCGACGAAGCCTTATTTAAAGAGTGTATGAGTCGATTTGCTACAGGAATATCAGTTGTAGCAACCAGTTTCATGGG
AGAAAAGTATGGAATAACAGTTAGCTCACTCTGCTCAGTATCGCTGAAACCACAACTAATCTCGTACTGCCTCGATAGAA
ATTCAAGTAGGTTTGACGTCTTCTTCTCCGCGGCAGAGTTTGTGGTGAGCGTATTAGACGAAACAGCTAAGCAAACCTCA
ATTTCATTCTCGCAGAATAATACCCAAGCATGGAAAGAAGAATTTTCAACGGGCTTGGAATTAAAAAAAGCATTGTGTTG
GGTGTATTGTCGCACCAGATATCGGTACGATGCCGGCGATCATAAAATCATCGTCGCCGCGGTAGAGAAAAAAAAGCTTA
ATGTTTCAAAACCCCTTCCTTTGGTCTACTATAGGAAGGGTTACTGCTCAATCAGGTAG

Upstream 100 bases:

>100_bases
AATCTATAAACTTAGATGATCCAAAAAACTGCGGAATGGCGTTCAAGCGAATGAATTTTGTTGGCGTGCTCATTTTCCTT
ATTATTCTACTAGGTAGACT

Downstream 100 bases:

>100_bases
ATAGACGCAACAGCTAAAAGCCCAAAAAGCATCAAGTTTCCAGCAAAACAGCGGTGAGGTGTAAGTGGTGTCTCTCATAG
TGGTTAATAGATCTGGCTCT

Product: flavin reductase family protein

Products: NAD(+); reduced flavin [C]

Alternate protein names: 4-HPA 3-monooxygenase small component; Flavin:NADH reductase [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSDEALFKECMSRFATGISVVATSFMGEKYGITVSSLCSVSLKPQLISYCLDRNSSRFDVFFSAAEFVVSVLDETAKQTS
ISFSQNNTQAWKEEFSTGLELKKALCWVYCRTRYRYDAGDHKIIVAAVEKKKLNVSKPLPLVYYRKGYCSIR

Sequences:

>Translated_152_residues
MSDEALFKECMSRFATGISVVATSFMGEKYGITVSSLCSVSLKPQLISYCLDRNSSRFDVFFSAAEFVVSVLDETAKQTS
ISFSQNNTQAWKEEFSTGLELKKALCWVYCRTRYRYDAGDHKIIVAAVEKKKLNVSKPLPLVYYRKGYCSIR
>Mature_151_residues
SDEALFKECMSRFATGISVVATSFMGEKYGITVSSLCSVSLKPQLISYCLDRNSSRFDVFFSAAEFVVSVLDETAKQTSI
SFSQNNTQAWKEEFSTGLELKKALCWVYCRTRYRYDAGDHKIIVAAVEKKKLNVSKPLPLVYYRKGYCSIR

Specific function: Catalyzes the reduction of free flavins (FMN, FAD and riboflavin) by NADH. Subsequently, the reduced flavins diffuse to the large hpaB component [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. HpaC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: 1.6.8.- [C]

Molecular weight: Translated: 17225; Mature: 17094

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEALFKECMSRFATGISVVATSFMGEKYGITVSSLCSVSLKPQLISYCLDRNSSRFDV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCHHH
FFSAAEFVVSVLDETAKQTSISFSQNNTQAWKEEFSTGLELKKALCWVYCRTRYRYDAGD
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
HKIIVAAVEKKKLNVSKPLPLVYYRKGYCSIR
CEEEEEEECCCCCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
SDEALFKECMSRFATGISVVATSFMGEKYGITVSSLCSVSLKPQLISYCLDRNSSRFDV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHCCCCCCHHH
FFSAAEFVVSVLDETAKQTSISFSQNNTQAWKEEFSTGLELKKALCWVYCRTRYRYDAGD
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
HKIIVAAVEKKKLNVSKPLPLVYYRKGYCSIR
CEEEEEEECCCCCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; flavin [C]

Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA